Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq21 100 5e-19
seq114 87.8 3e-15
seq50 86.0 1e-14
seq39 86.0 1e-14
seq125 82.4 1e-13
seq2 80.6 4e-13
seq87 78.8 2e-12
seq19 78.8 2e-12
seq166 77.0 5e-12
seq17 75.2 2e-11
seq136 73.4 6e-11
>seq21
Length=27742158
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | |||||| | ||||| | || | || |||| || || |
Sbjct 21633604 GTACGAGAGGAACTGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 21633547
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 21633546 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 21633493
>seq114
Length=7082604
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/114 (79%), Gaps = 3/114 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| ||||||||| | | |||||| | ||||||| || | || |||| | || |
Sbjct 232653 GTAC-AGAGGAACCACAGG-TTCAGAC-ATTTGGTTTATGTGCTTGGCTGAGGGGCCAAT 232709
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct 232710 GGGGCGAAGCTACAATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 232763
>seq50
Length=16452072
Score = 86.0 bits (94), Expect = 1e-14
Identities = 76/94 (81%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80
|||||| | ||||| | || | || |||| || || || ||||||||||||||||
Sbjct 12289490 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGT 12289548
Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||| ||||||||||||||||||||||||
Sbjct 12289549 GGGATTATGACTGAACGCCTCTAAGTCAGAATCC 12289582
>seq39
Length=18744880
Score = 86.0 bits (94), Expect = 1e-14
Identities = 76/94 (81%), Gaps = 1/94 (1%)
Strand=Plus/Minus
Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80
|||||| | ||||| | || | || |||| || || || ||||||||||||||||
Sbjct 3816962 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGT 3816904
Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||| ||||||||||||||||||||||||
Sbjct 3816903 GGGATTATGACTGAACGCCTCTAAGTCAGAATCC 3816870
>seq125
Length=6287927
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || |||||||||||||||| |||||||| ||||||||||||||
Sbjct 2945399 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAA 2945340
Query 105 GTCAGAATCC 114
||||||||||
Sbjct 2945339 GTCAGAATCC 2945330
>seq2
Length=71252344
Score = 80.6 bits (88), Expect = 4e-13
Identities = 58/67 (87%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 48 CTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC 107
|||| || || || |||||||||||||||| |||||||| |||||||||||||||||
Sbjct 49680261 CTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTC 49680320
Query 108 AGAATCC 114
|||||||
Sbjct 49680321 AGAATCC 49680327
>seq87
Length=9475965
Score = 78.8 bits (86), Expect = 2e-12
Identities = 67/83 (81%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 32 TGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGC 91
|||||| || | || |||| || || || | |||||||||||||| |||||||| |
Sbjct 8782737 TGGTTTATGTGCTTGGCTGAGGAGCCAATGGGGTGAAGCTACCATCTGTGGGATTATGAC 8782678
Query 92 TGAACGCCTCTAAGTCAGAATCC 114
||||||||||||||||||||||
Sbjct 8782677 CGAACGCCTCTAAGTCAGAATCC 8782655
>seq19
Length=29834108
Score = 78.8 bits (86), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 27540775 GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 27540725
Score = 73.4 bits (80), Expect = 6e-11
Identities = 77/99 (78%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80
|||||| | ||||| | || | || |||| || || || | |||||||||||||
Sbjct 6091256 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGTGAAGCTACCATCTCT 6091314
Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
|||||||| ||||| |||||||||||||||||| ||||
Sbjct 6091315 GGGATTATGACTGAATGCCTCTAAGTCAGAATCC-TGCC 6091352
>seq166
Length=3507382
Score = 77.0 bits (84), Expect = 5e-12
Identities = 74/94 (79%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80
|||||| | ||||| | || | || |||| || || || |||||||||| |||||
Sbjct 1973148 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACGATCTGT 1973206
Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||| |||||||||| |||||||||||||
Sbjct 1973207 GGGATTATGACTGAACGCCTGTAAGTCAGAATCC 1973240
>seq17
Length=31320352
Score = 75.2 bits (82), Expect = 2e-11
Identities = 51/56 (91%), Gaps = 1/56 (2%)
Strand=Plus/Plus
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
|||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||
Sbjct 20843976 GCGAAGCTACCATCTGTGGGATTATGACTGAACGTCTCTAAGTCAGAATCC-TGCC 20844030
>seq136
Length=5571892
Score = 73.4 bits (80), Expect = 6e-11
Identities = 86/114 (75%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| ||||||||| | | |||||| | ||| | | || | || |||| || || |
Sbjct 2307970 GTACAAGAGGAACCACA-AGTTCAGAC-ATTTGTTGTATGTGCTTGGCTGAGGAGCCAAT 2308027
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| || |||||| |||||| |||||||| || || ||||||||||||||||||
Sbjct 2308028 GAGGCAAAGCTAGCATCTGTGGGATTATGACTAAATGCCTCTAAGTCAGAATCC 2308081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819178683904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |