Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq25 113 1e-22 >seq25 Length=25294431 Score = 113 bits (124), Expect = 1e-22 Identities = 95/112 (85%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTA 452 |||| ||| ||||||||||||||||||| || |||||||||||||| ||| | Sbjct 20043746 CAAAGGAACCATAACTGATTTAATGAGCCTTT-GCAGTTTCACTGTACCCGCCATGC--A 20043690 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||| |||||||||||||||||||||| ||||||||| |||||||||| Sbjct 20043689 TACTTAGATATGCATGGCTTAATCTTTGAGAAAAGCATATG-CTACTGGCAG 20043639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510359430656