Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq44792 150 3e-34 >seq44792 Length=69869 Score = 150 bits (166), Expect = 3e-34 Identities = 184/248 (74%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTAGCAT 130 |||||||||||||||||||||||||||||||||||| || | |||| ||| Sbjct 33059 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 33118 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 |||||||| ||||||||| ||||||||||||||||||||| | || | | ||||| Sbjct 33119 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 33177 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| |||||| | |||||| | ||||| | ||||||| |||||||||| Sbjct 33178 TAAGAGGGATGGCCGGGGGCATTTGTATTGCGCCGCTAGAGGTGGAATTCTTGGACCCGC 33237 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| || | | ||||| || ||||| |||||||||||||||| |||| ||| Sbjct 33238 ACAAGACGGACCAGAGAAAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACAAAA 33296 Query 311 GTTAGGGG 318 || || || Sbjct 33297 GTCAGAGG 33304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914735536000