Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq56 491 1e-136 seq46599 398 2e-108 seq44792 389 1e-105 seq549 381 2e-103 seq140 381 2e-103 seq631 358 2e-96 seq638 325 1e-86 seq705 271 2e-70 seq138 269 9e-70 seq157 168 2e-39 seq383 149 2e-33 seq40132 134 5e-29 seq654 109 2e-21 seq231 91.5 5e-16 seq44037 86.0 2e-14 seq770 80.6 9e-13 seq224 77.0 1e-11 >seq56 Length=51353 Score = 491 bits (544), Expect = 1e-136 Identities = 460/595 (77%), Gaps = 69/595 (12%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 33641 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 33700 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| || Sbjct 33701 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGTC 33760 Query 127 G-GCCCG-----CGAAGGAC-----CTTAACGCCAGAAAATGG------TCGGTGAAGAC 169 | ||||| || || | ||| |||||||| | |||| | | Sbjct 33761 GCGCCCGGCCGACGCCGGCCGGGCGCTTGGCGCCAGAAGCGAGAGCCCCTCGGGGCTCGC 33820 Query 170 CAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-- 227 | |||| ||| | | ||| ||||||||||||| ||||||||||||||| ||| Sbjct 33821 CCCC-CCGCCTCACCGGGTCAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGC 33879 Query 228 CCGAAA---------------------------------------------CGG----CT 238 ||| || ||| || Sbjct 33880 CCGCAAGGCCGGCGGACCCCGCCCCGCCCCCTCGCGGGGACGGGAGGGCGCCGGGGGCCT 33939 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 |||||||||||||||||||||| ||| ||||| | | |||||||||||||||||||| Sbjct 33940 CCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACA 33999 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 34000 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGAT 34059 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 34060 AGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGAC 34119 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 34120 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATT 34179 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 34180 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 34234 >seq46599 Length=835 Score = 398 bits (440), Expect = 2e-108 Identities = 265/297 (89%), Gaps = 12/297 (4%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | | |||||||||||||||||| Sbjct 364 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCATGCCAGACTAGAGTCAAGCTCAA 423 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||| |||||||||||||||||||| || | Sbjct 424 CAGGGTCTTCTTTCCCCGCTGAT------------GTTCCCTTGGCTGTGGTTTCACTGG 471 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct 472 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGTGTGTCACTAATTAGATG 531 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 532 ACGAGGCATTTGGTTACCTTAAGAGAGTCATAGTTACTCCTGCCATTTACCCGCGCTTCA 591 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 592 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGTAGAAATCACATGGCGTCAACA 648 Score = 104 bits (114), Expect = 8e-20 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||| Sbjct 66 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGGCTTAGGACACCTGCGTTACC 125 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| | ||||||| ||||||||||||||| || |||| Sbjct 126 ATTTGACAGGTGTACTGCCCCAGTCAAACTCCCCACCTGGCACTGTC 172 >seq44792 Length=69869 Score = 389 bits (430), Expect = 1e-105 Identities = 265/297 (89%), Gaps = 1/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||| |||||||| ||| ||||| | | |||||||||||||||||| Sbjct 41815 CTCCCACTTATTCTATACCTCTCATGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAA 41756 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||| |||| |||||||| ||||| ||||||||| ||||||||||||| | Sbjct 41755 CAGGGTCTTCTT-CCCCACTGATTCCATCAAGCTTGTTCCCTTGACTGTGGTTTCGCTGG 41697 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 41696 ATAGTAGACAGGGACAGTGGGAATCTCGTTCATCCATTCATGCACGTCACTAATTAGATG 41637 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||| ||||||||||||||||||||| || || ||| | |||| Sbjct 41636 ACGAGGCATTTGGCTACCTAAAGAGAGTCATAGTTACTCCCCCCATTAACCAGTGCTTCA 41577 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct 41576 TTGAATTTTTTCACTTTGACATTCAGACCACTGGGTAGAAATCACATCGCGTCAACA 41520 Score = 98.7 bits (108), Expect = 3e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 14 TCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAAC 73 || || |||| ||||||| |||| ||| | ||||||||||||||||||| ||| || Sbjct 42104 TCCACGGGAGGTTTCTGTCCTCCCTGAACTCGCCTTAGGACACCTGCGTTACCATTTGAC 42045 Query 74 AGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 || ||| ||||||||| ||||||||||||||| || ||| Sbjct 42044 AGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGT 42006 >seq549 Length=3239410 Score = 381 bits (422), Expect = 2e-103 Identities = 262/296 (89%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||| | | ||||| | |||||||||| Sbjct 2185010 CTCCCACTTATTCTACACCTCTCATGTCTCTTCGGCGTGCCAGACTAAAATCAAGCTCAA 2184951 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 | ||||||| |||||| ||||||||| |||||||| |||||||||||||||||| ||| | Sbjct 2184950 CGGGGTCTTATTTCCCTGCTGATTCCACCAAGCCCATTCCCTTGGCTGTGGTTTTGCTGG 2184891 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct 2184890 ATAGTAGGTAGGGACAGTAGGAATCTCGTTCATCCATTCATGCGCATCACTAATTAGATG 2184831 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || ||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||| Sbjct 2184830 ACAAGGCATTTGGCTAACTTAAGAGAGTCATAGTTACTCCTGCCATTTACCTGCGCTTCA 2184771 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 ||||||||| |||||||||||||||||||||||| ||||||||| || |||||||| Sbjct 2184770 TTGAATTTCGTCACTTTGACATTCAGAGCACTGGACAGAAATCATATCGCGTCAAC 2184715 >seq140 Length=1865453 Score = 381 bits (422), Expect = 2e-103 Identities = 262/296 (89%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||| | | ||||| | |||||||||| Sbjct 1589180 CTCCCACTTATTCTACACCTCTCATGTCTCTTCGGCGTGCCAGACTAAAATCAAGCTCAA 1589121 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 | ||||||| |||||| ||||||||| |||||||| |||||||||||||||||| ||| | Sbjct 1589120 CGGGGTCTTATTTCCCTGCTGATTCCACCAAGCCCATTCCCTTGGCTGTGGTTTTGCTGG 1589061 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct 1589060 ATAGTAGGTAGGGACAGTAGGAATCTCGTTCATCCATTCATGCGCATCACTAATTAGATG 1589001 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || ||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||| Sbjct 1589000 ACAAGGCATTTGGCTAACTTAAGAGAGTCATAGTTACTCCTGCCATTTACCTGCGCTTCA 1588941 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 ||||||||| |||||||||||||||||||||||| ||||||||| || |||||||| Sbjct 1588940 TTGAATTTCGTCACTTTGACATTCAGAGCACTGGACAGAAATCATATCGCGTCAAC 1588885 >seq631 Length=3768130 Score = 358 bits (396), Expect = 2e-96 Identities = 259/298 (87%), Gaps = 1/298 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 1283641 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAA 1283700 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||| ||||||||||||| ||||||| |||||||| ||||||||||||||||||| || | Sbjct 1283701 CAGTGTCTTCTTTCCCCAATGATTCCACCAAGCCCATTCCCTTGGCTGTGGTTTCACTGG 1283760 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| || ||||||||||| |||| || ||||||||| | ||||||||||||||| Sbjct 1283761 ATAGTAGGTAAGGACAGTGGGACTCTCATTCATCCATTCACAAGTGTCACTAATTAGATG 1283820 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC-GCGCTTG 475 || |||||| |||||||||||||||||||||| | ||||| |||||||| | ||| Sbjct 1283821 GGGAAGCATTTAGCTACCTTAAGAGAGTCATAGTGATTCCCGTTGTTTACCCTACAGTTG 1283880 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 1283881 ATTGAATTTCTTCACTTTGACATTCAGAGCACTGAGCAGAAATCACATTGTGTCAACA 1283938 >seq638 Length=324961 Score = 325 bits (360), Expect = 1e-86 Identities = 223/255 (87%), Gaps = 15/255 (6%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 ||||||||||||||||||||||||||||||||||| ||||||| ||||| | | |||||| Sbjct 145237 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCACTGATTCTGCCAAACTCATTCCCT 145296 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||| ||| |||||||| ||||||||||||||||||| || |||||||| Sbjct 145297 TGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTC--- 145353 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 145354 ------------TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 145401 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 145402 CCTTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAC 145461 Query 519 CACATTGCGTCAACA 533 ||||| | |||||| Sbjct 145462 CACATCACCTCAACA 145476 >seq705 Length=5220317 Score = 271 bits (300), Expect = 2e-70 Identities = 231/282 (82%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 |||||||||||| |||||| ||| |||| | | | |||| ||||||||||||||||| Sbjct 2301428 ACTTATTCTACATCTCTCATGTCTCTTCATCATGCCAGACTGAAGTCAAGCTCAACAGGG 2301487 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||| || | |||| |||||||| |||||||||| ||| ||||| ||||||||| Sbjct 2301488 TCTTCTTTCTCCACCCATTCTGCCAAGCCTGTTCCCTTGGTTGTAGTTTCACTAGATAGT 2301547 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 || |||||| || |||||||| | ||||||||||| || |||||| ||||||||| || Sbjct 2301548 AGGTAGGGATAG-GGGAATCTGACTCATCCATTCATGGGCATCACTAGTTAGATGACAAG 2301606 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 ||| |||||| |||||||||||||| | | || || | | ||||| | || ||||| Sbjct 2301607 GCAGTTGGCTCCCTTAAGAGAGTCACAATCAC-CCTGTCATTTACTGCCATTTCATTGAA 2301665 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 ||||||||||||||| |||||||| | |||||||||| |||| Sbjct 2301666 TTTCTTCACTTTGACTTTCAGAGCCCCGGGCAGAAATTACAT 2301707 >seq138 Length=4208748 Score = 269 bits (298), Expect = 9e-70 Identities = 248/311 (80%), Gaps = 16/311 (5%) Strand=Plus/Minus Query 237 CTCCCACTTATT---CTACACCTCTCAAGT-----CATT----TCACAAAGTCGGACTAG 284 |||||||||||| |||||||||||| || || | |||| | ||| |||||| Sbjct 2333839 CTCCCACTTATTATTCTACACCTCTCATGTGTCTTCACTGTCTTCACCATGTCAGACTAG 2333780 Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCT--GATTCCGCCAAGCCCGTTCCCTTGGC 342 ||| |||||||||| ||| | | ||| | ||||| || | ||||||||||||| Sbjct 2333779 AGTAGAGCTCAACAGAGTCGCCCCTGCCCCCATGGATTCGTCCTAATCCGTTCCCTTGGC 2333720 Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 402 |||| ||||| |||||||| |||||| ||||| |||||| || |||||||||||| | Sbjct 2333719 CATGGTATCGCTGGATAGTAGGTAGGGATAGTGGAAATCTCATTCATCCATTCATGCACA 2333660 Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 ||||||||||||||||||||||||||||||||||| |||||||||||| |||| || || Sbjct 2333659 TCACTAATTAGATGACGAGGCATTTGGCTACCTTA--AGAGTCATAGTTCCTCCTGCTGT 2333602 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 |||||| |||| |||||| |||||| ||||| ||||||||||||||| | ||| |||| Sbjct 2333601 TTACCCATGCTTTATTGAATGTCTTCATTTTGATATTCAGAGCACTGGGGAAAAACCACA 2333542 Query 523 TTGCGTCAACA 533 | | |||||| Sbjct 2333541 TCACATCAACA 2333531 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||||||| ||||||| || | |||| ||||||||||||||||||| | Sbjct 2334125 CTTCTGTTCCACAGGAGGTTTCTGTCCTACCTGAGCTTGCCTTAGGACACCTGCGTTAGG 2334066 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| | || | | | ||||||| |||| || ||||||| || |||| Sbjct 2334065 GTTTGAAAGGTATACTGCCCCAGACAAATTCTCCACCTGGCACTGTC 2334019 >seq157 Length=11509200 Score = 168 bits (186), Expect = 2e-39 Identities = 195/259 (75%), Gaps = 13/259 (5%) Strand=Plus/Minus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT--------- 339 ||||||| ||| ||||||| | | || |||| | |||||| || | ||| Sbjct 7833504 AAGCTCA-CAGAGTCTTCTACCTTCACTTATTCTGTCAAGCCTGT-CACTTATTCTGTCA 7833447 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||| || |||| ||| | ||| ||||| |||||| || |||| | || Sbjct 7833446 GGCTGTGGTTTCACTGGATAATAG-TGGGGGTAGTGGAAATCTCATTCATCCGCTTATAT 7833388 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 || | ||||||||| ||| ||| | | |||||||| || ||||||||| |||||| || Sbjct 7833387 GCATTACTAATTAGCTGATGAGACTTCTGGCTACCATATGAGAGTCATGGTTACTACCAG 7833328 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 | ||||||| | | || ||||||||||| || |||||||| ||||||||||||||| Sbjct 7833327 CACGTACCCGCTCGTCATTTAATTTCTTCACGCTGTCATTCAGAACACTGGGCAGAAATC 7833268 Query 520 ACATTGCGTCAACA-TCAC 537 |||||| ||||||| |||| Sbjct 7833267 ACATTGTGTCAACACTCAC 7833249 >seq383 Length=10610733 Score = 149 bits (164), Expect = 2e-33 Identities = 145/184 (79%), Gaps = 6/184 (3%) Strand=Plus/Minus Query 340 GGCTGTGGTTTCGC----TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395 |||||||||||| | | | ||| || | || ||||| |||||| || ||||||| Sbjct 4154923 GGCTGTGGTTTCACCCTGTGGGTAGCAGGAAAGGGCAGTGATAATCTCCTTCGTCCATTC 4154864 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 455 | || |||||| ||||| |||| ||| || |||||| ||||||||||||||| ||||| Sbjct 4154863 ACCCGTGTCACTGATTAGGTGACAAGGTGTT-GGCTACTTTAAGAGAGTCATAGCTACTC 4154805 Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515 | || ||||||| | ||| ||||||||||||||| |||||||||||| | ||||||| Sbjct 4154804 CGACC-TTTACCCACCCTTTCTTGAATTTCTTCACTGTGACATTCAGAGTGCCGGGCAGA 4154746 Query 516 AATC 519 |||| Sbjct 4154745 AATC 4154742 >seq40132 Length=2826960 Score = 134 bits (148), Expect = 5e-29 Identities = 140/178 (79%), Gaps = 8/178 (4%) Strand=Plus/Plus Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG- 299 |||||||||||||||||||| ||| |||||| | | | ||| | | ||| | ||||||| Sbjct 450856 CACTTATTCTACACCTCTCATGTCTTTTCACCAGGCCAGACGAAAATCATGATCAACAGA 450915 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||| || | ||||| | ||| || |||||||||||||||||| | |||| Sbjct 450916 GGTCTTCTTT-CCTGATGATTACACCA--GCCTTTCCCTTGGCTGTGGTTT--TTGGATA 450970 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 || | | |||||||| | || || |||||||||||| | ||||||||||||||| Sbjct 450971 GTGGGAAAGGACAGTGCTCA--TCCTTTATCCATTCATGCACATCACTAATTAGATGA 451026 >seq654 Length=3918371 Score = 109 bits (120), Expect = 2e-21 Identities = 74/83 (89%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369 ||| |||||||| |||||||||||| ||||||||||||||| ||| |||||||||||| | Sbjct 573345 CCCTGCTGATTCTGCCAAGCCCGTTTCCTTGGCTGTGGTTTTGCTGGATAGTAGATAGAG 573404 Query 370 ACAGTGGGAATCTCGTTAATCCA 392 ||||||||||| || || ||||| Sbjct 573405 ACAGTGGGAATTTCATTCATCCA 573427 >seq231 Length=9897518 Score = 91.5 bits (100), Expect = 5e-16 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 828605 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 828556 >seq44037 Length=1602457 Score = 86.0 bits (94), Expect = 2e-14 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 || ||||| || |||| ||||||| |||| ||||| ||||||||||||||| ||| | Sbjct 833283 TTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGTTAGCCTTAGGACACCTGCATTAGCG 833224 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 ||| ||| ||| | | ||| ||||||||||||||| || ||| Sbjct 833223 TTTGGCAGGTGTTCTGTTTCAGTCAAACTCCCCACCTGGCACTGT 833179 >seq770 Length=2209419 Score = 80.6 bits (88), Expect = 9e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||| | ||||| |||| | | ||||||| ||| |||||||||||| ||||||| Sbjct 830937 AAGAGAATTCTAGTTGCTCCAGTCTTTTACCCAGACTTCATTGAATTTCTTCCCTTTGAC 830996 Query 497 ATTCAGAGCACTGGGCAGAAAT 518 | | |||||||||||||||||| Sbjct 830997 ACTTAGAGCACTGGGCAGAAAT 831018 >seq224 Length=3916490 Score = 77.0 bits (84), Expect = 1e-11 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCAT 393 ||||||||||||||| | |||||||| || ||||||||||||||||||| |||||| Sbjct 1280716 CTTGGCTGTGGTTTCAGTGGATAGTAGGTAAGGACAGTGGGAATCTCGTTCATCCAT 1280772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634370136000