Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq398 86.0 3e-11 >seq398 Length=3125954 Score = 86.0 bits (94), Expect = 3e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 |||||| |||||||||| ||||| |||||||||||||| | ||||| ||| ||||||| Sbjct 1072756 CTCCTTAAGTCTGGGCACACCCAGTGTCACGTTCTTGGCAGACACGCCAGCATAGTGGAA 1072815 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | | ||||| ||| || || || |||| | |||| | || || || || Sbjct 1072816 GGTGTTCAAGGTCATCTGAGTAGCAGGTTCTCCGAGGGACTGTGCGGCCAGAGCTCCCAC 1072875 Query 349204 CATCTCGCCGGG 349215 |||||| || || Sbjct 1072876 CATCTCCCCAGG 1072887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083350568248500