Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apodemus_20sylvaticus_20[genbank_20GCA_5F001305905.1_202015-10-02] 559,629 sequences; 3,758,143,898 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2334 77.0 6e-12 >seq2334 Length=1238109 Score = 77.0 bits (84), Expect = 6e-12 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | || | |||| ||| | ||||| |||||||||||||||| Sbjct 246049 CTTCTTAGAGGGACAAGTGGTGTTCAGCCACCGGA-GATTGAG-CAATAACAGGTCTGTG 246106 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 ||||||| |||||| | ||| |||||| ||| ||||||| Sbjct 246107 ATGCCCTCAGATGTCCGTGGCTGCACGCACGCCTCACTGAC 246147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 941899194112