Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq18024 161 5e-38 seq6961 161 5e-38 seq20301 149 3e-34 seq10808 149 3e-34 seq20442 122 4e-26 >seq18024 Length=276033 Score = 161 bits (178), Expect = 5e-38 Identities = 97/102 (95%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 269360 GGAAAAGAAACTAACGAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 269419 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||| ||||| | |||||||||| ||||||||| Sbjct 269420 CCGAATCCCCGCCGCGCGGCGCGGCGCGGGACGTGTGGCGTA 269461 >seq6961 Length=175213 Score = 161 bits (178), Expect = 5e-38 Identities = 97/102 (95%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 169381 GGAAAAGAAACTAACGAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 169322 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||| ||||| | |||||||||| ||||||||| Sbjct 169321 CCGAATCCCCGCCGCGCGGCGCGGCGCGGGACGTGTGGCGTA 169280 >seq20301 Length=17530 Score = 149 bits (164), Expect = 3e-34 Identities = 96/103 (93%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGA-GTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 256 GGAAAAGAAACTAAC--GGATTCCCTCAGTAACGGCGACGTGAACAGGGAAGAGCCCAGC 313 Query 60 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||| ||||| | |||||||||| ||||||||| Sbjct 314 GCCGAATCCCCGCCGCGCGGCGCGGCGCGGGACGTGTGGCGTA 356 >seq10808 Length=7174 Score = 149 bits (164), Expect = 3e-34 Identities = 95/102 (93%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 5085 GGAAAAGAAACTAACGAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 5144 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||| ||||| | | ||||||| ||||||||| Sbjct 5145 CCGAATCCCCGCCGCGCGG-GCGCGGCGGGACGTGTGGCGTA 5185 >seq20442 Length=10053 Score = 122 bits (134), Expect = 4e-26 Identities = 90/102 (88%), Gaps = 5/102 (5%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| Sbjct 9492 GGAAAAGAAACTAAC--GGATTCCCTCAGTAACGCGAAGTGAACAGG--AGAGCCCAGCG 9547 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| | ||||| | |||||||||| ||||||||| Sbjct 9548 CCGAATCCCCG-CGCGCGGCGCGGCGCGGGACGTGTGGCGTA 9588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230354300880