Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03] 3,144 sequences; 2,723,219,641 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq3128 93.3 2e-13 >seq3128 Length=41762041 Score = 93.3 bits (102), Expect = 2e-13 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131 ||||| || |||||||||| | ||||| |||||||| | |||| ||| || ||||| Sbjct 26174247 GGCGTTGATGATCTCCTTGATGCGGGGCACACCCAGGGTGATGTTCATGGAGGCCACGCC 26174306 Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTG 349185 || ||||||||||||| ||||||| ||| ||| |||||||| |||| ||| Sbjct 26174307 CGCGAAGTGGAAGGTCTTCAGGGTCATCTGGGTGCCCGGCTCGCCAATGCTCTG 26174360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084653173236912