Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1926 87.8 8e-16 seq371 87.8 8e-16 >seq1926 Length=254242 Score = 87.8 bits (96), Expect = 8e-16 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCC 56 |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| Sbjct 223233 GGAAAAGAAACTAATCAGGGTTCCCTCAGTAATGGCGAGTGAACAGGGAAGAGCCC 223178 >seq371 Length=1551506 Score = 87.8 bits (96), Expect = 8e-16 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||||| |||||| |||||||||||||||||| || Sbjct 1052473 GAAAAGAAACTAACCAGGATTCCCTCATTAACGGTGAGTGAACAGGGAAGAGCTCA 1052528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230164231680