Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq398 134 3e-29 >seq398 Length=382803 Score = 134 bits (148), Expect = 3e-29 Identities = 201/280 (72%), Gaps = 14/280 (5%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| |||||| | | | ||||||||||||||||||||||| Sbjct 242335 ATGCGCTTAGCTGAGTGTCCCGCGGAGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGC 242276 Query 98 TCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||| ||||| || | |||| | | |||| ||| ||||||||| |||| Sbjct 242275 TCAAAGTAGGCCCGAGCCGCCTGGATACCGCATCTAGGAAGAATGGAATAGGAC-CGCGG 242217 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| | |||| | |||||| | | |||||| | Sbjct 242216 TTCTATTTTGTTGGTTTTCGGAACCGAGGCCATGATT-------ACGGCCGGGGGCATTC 242164 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC-TAACTACTGCGAAAGC 273 ||||| | |||||||||||||||||| | ||||| | | | |||||||| Sbjct 242163 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGTGCAAGACGGACCCAGAGCGAAAGC 242104 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 || ||||| |||||||||||||||| ||||| ||||| Sbjct 242103 ATTTGCCAAGAATGTTTTCATTAATCA-AGAACGGAAGTT 242065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914665312704