Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2865 86.0 1e-14 seq799 73.4 6e-11 >seq2865 Length=477393 Score = 86.0 bits (94), Expect = 1e-14 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||| | ||| ||| | |||||||||||||||||||||||||||||| || Sbjct 422802 GTCAGTGTAGCATACATGCAACCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 422744 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | || || |||||| | |||| | |||||||| ||||| Sbjct 422743 C-AATATCAGGTGGCTGAATGCCACTTGTCCCTCTTAGAAG 422704 >seq799 Length=633943 Score = 73.4 bits (80), Expect = 6e-11 Identities = 76/97 (78%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||| ||| ||| |||||||| |||||| || ||||||| ||||||| ||||||| Sbjct 502578 TCTCATTCATTAGTGGAATTAAACAGACAGATTGTTCCACCAGCTAAGAATAGCCATGCG 502637 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 | ||||| ||||| ||||||||||||| ||||| Sbjct 502638 TC-CCACC-ATAGAGATGAGAAAGAGCTATCGATCTG 502672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796349032863