Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq6161 188 1e-45 seq9843 102 1e-19 >seq6161 Length=159338 Score = 188 bits (208), Expect = 1e-45 Identities = 141/165 (85%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||||| |||||||| ||||||||||| | ||||||| || |||| ||||| |||||| Sbjct 59994 CAGTAAGGTAAAAC----CTGTCTCATGAAGATCTAAACACATCTCATGTTCCTTATTAG 59939 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||| ||| |||||||||||| |||||||||||||| |||||| Sbjct 59938 TGGGTGAACAATCCAACTCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTGACATC 59879 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA 199 |||||||||||||||| || |||||||||||||||| |||||| Sbjct 59878 TAAGGATCAAAAAGCAATGTTGCTATGAACGCTTGGCCACCACAA 59834 >seq9843 Length=51744 Score = 102 bits (112), Expect = 1e-19 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 66 GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCT 125 |||||||||||| ||| ||||| | ||||||||||||||||||||||||| ||| ||| Sbjct 33224 GTCTAAACCCAGATCATGTTCCTTGTTAGTGGGTGAACAATCCAACGCTTGGTGAAGTCT 33283 Query 126 GCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||| |||||||||||| || ||||| Sbjct 33284 GCTTCACAATGATAGGAAGAACCAACATC 33312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853900833888