Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3765 396 9e-108 seq783 277 6e-72 seq15407 235 2e-59 seq11343 235 2e-59 seq2867 199 1e-48 seq5788 190 7e-46 seq9933 188 2e-45 seq21286 129 2e-27 seq21280 129 2e-27 seq205 127 7e-27 seq11166 114 4e-23 seq10066 96.9 1e-17 seq16666 84.2 7e-14 >seq3765 Length=127192 Score = 396 bits (438), Expect = 9e-108 Identities = 264/294 (90%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 || |||||||| ||||||||| ||| ||||| | | ||||||||||||||||||||| Sbjct 117050 CCGCTTATTCTGCACCTCTCATGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAACAG 117109 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||| |||||||||||| |||||| ||||||||| ||||||||||||| |||| Sbjct 117110 GGTCTTCTTTGCCCGCTGATTCCACCAAGCTGGTTCCCTTGTCTGTGGTTTCGCTGGATA 117169 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||| || ||||||||||||||||||| |||||||||||||| ||| ||||||||||||| Sbjct 117170 GTAGGTACGGACAGTGGGAATCTCGTTCATCCATTCATGCGCATCATTAATTAGATGACG 117229 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||| Sbjct 117230 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCATTTACCCCTGCTTCATTG 117289 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct 117290 AATTTCTTCACTATGACATTCAGAGCACTGGGCAGAAATCACATCGTATCAACA 117343 >seq783 Length=305356 Score = 277 bits (306), Expect = 6e-72 Identities = 168/178 (94%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 78751 GATAGTAGGTAAGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGAT 78692 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct 78691 GACGAGGCATTTGGCTACCTTAAGAGAGTCCTAGTTACCCCCGCCGTTTACCAGCGCTTC 78632 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 78631 ATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCATCAACA 78574 >seq15407 Length=15530 Score = 235 bits (260), Expect = 2e-59 Identities = 147/157 (94%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||| ||||||||||| || ||||||||||| |||||||||||||||| |||||||||| Sbjct 14204 GGGAGGGTGGGAATCTCCTTCATCCATTCATGTGCGTCACTAATTAGAT-ACGAGGCATT 14146 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||| Sbjct 14145 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCATTTACCCACGCTTCATTGAATTTCT 14086 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 ||||||||||||||||||||||||||||||||||||| Sbjct 14085 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 14049 >seq11343 Length=31072 Score = 235 bits (260), Expect = 2e-59 Identities = 147/157 (94%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||| ||||||||||| || ||||||||||| |||||||||||||||| |||||||||| Sbjct 14204 GGGAGGGTGGGAATCTCCTTCATCCATTCATGTGCGTCACTAATTAGAT-ACGAGGCATT 14146 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||| Sbjct 14145 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCATTTACCCACGCTTCATTGAATTTCT 14086 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 ||||||||||||||||||||||||||||||||||||| Sbjct 14085 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 14049 >seq2867 Length=180612 Score = 199 bits (220), Expect = 1e-48 Identities = 116/120 (97%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 180612 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCTGCGCT 180553 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 180552 TTATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 180493 >seq5788 Length=97305 Score = 190 bits (210), Expect = 7e-46 Identities = 110/113 (97%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct 40639 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACCGTTTACCCGCGCTTCATTGA 40698 Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 40699 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 40751 >seq9933 Length=40406 Score = 188 bits (208), Expect = 2e-45 Identities = 118/127 (93%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 19529 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 19470 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 19469 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 19410 Query 357 ATAGTAG 363 ||||||| Sbjct 19409 ATAGTAG 19403 >seq21286 Length=7131 Score = 129 bits (142), Expect = 2e-27 Identities = 74/76 (97%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 283 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGC 342 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 769 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCTGCTGATTCCGCCAAGCCCGTTCCCTTGGC 828 Query 343 TGTGGTTTCGCTAGAT 358 |||||||||||| ||| Sbjct 829 TGTGGTTTCGCTGGAT 844 >seq21280 Length=7132 Score = 129 bits (142), Expect = 2e-27 Identities = 74/76 (97%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 283 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGC 342 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 769 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCTGCTGATTCCGCCAAGCCCGTTCCCTTGGC 828 Query 343 TGTGGTTTCGCTAGAT 358 |||||||||||| ||| Sbjct 829 TGTGGTTTCGCTGGAT 844 >seq205 Length=463032 Score = 127 bits (140), Expect = 7e-27 Identities = 148/211 (70%), Gaps = 48/211 (23%) Strand=Plus/Minus Query 323 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 382 ||||||||| ||||||||||||||||||||| || ||||||||||||||| |||||||| Sbjct 431208 GCCAAGCCCCTTCCCTTGGCTGTGGTTTCGCGGGACAGTAGATAGGGACAGGGGGAATCT 431149 Query 383 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 442 |||| ||||||||||||| ||||| |||| Sbjct 431148 CGTT-CTCCATTCATGCGCATCACT-ATTA------------------------------ 431121 Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502 || ||||||||||||| |||||||||||||| ||||||||| Sbjct 431120 ----------------CCATTTACCCGCGCTTCACGGAATTTCTTCACTTCGACATTCAG 431077 Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||| || |||||| Sbjct 431076 AGCACTGGGCAGAAATCACATGGCCTCAACA 431046 >seq11166 Length=58139 Score = 114 bits (126), Expect = 4e-23 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370 |||||||| || |||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct 17442 CCCGCTGACTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGA 17501 Query 371 CAGTGGGAATCTCGTT 386 |||||||||||||||| Sbjct 17502 CAGTGGGAATCTCGTT 17517 >seq10066 Length=50918 Score = 96.9 bits (106), Expect = 1e-17 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | |||||| ||||||| |||| Sbjct 29038 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGTACACCTGTGTTACC 28979 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 ||| | |||||| ||||||||| ||||||||||||||| || ||| Sbjct 28978 ATTTGAAAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGT 28933 >seq16666 Length=20336 Score = 84.2 bits (92), Expect = 7e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 ||| |||| ||||||| | | | ||||||| || ||||||| | ||| ||||||||| Sbjct 8761 TTGACTACACTAAGAGACTAACATTTACTCCTACCTTTTACCCACTCTTAATTGAATTTC 8820 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||| ||||||| ||| || |||||||| ||||| Sbjct 8821 TTCACTTCAACATTCATAGCTGTGAGCAGAAATAACATT 8859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634244667104