Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq233516 181 2e-43 >seq233516 Length=983 Score = 181 bits (200), Expect = 2e-43 Identities = 211/282 (75%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 59 ATACTACCCCTGTTGTATTGGATTTCTAACCG-GACGACGTATAACCGTTGACGGGACAG 117 |||| |||| | | || | ||| |||||| | ||| |||||| ||| | |||| | Sbjct 737 ATACCACCCTTATCGTCATAGATGTCTAACTGCGACC-CGTATATCCGGGTCCAGGACCG 679 Query 118 TGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAA 177 ||| | ||| |||||||||||||||||||||||| |||||||||||||||||| | | Sbjct 678 TGTATGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGAGTAACGGAGGCGCGCGAT 619 Query 178 GATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACT 237 | | ||||| || ||||| | | || ||||||| |||| ||| | ||||| Sbjct 618 GGTGGGCTCAGAACGGTCGGAAATCGTTCGTCGAGTGCAATGGCATAAGCCCGCCTGACT 559 Query 238 GCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAAT 297 || | || |||||| ||||| |||||||||||| | || |||||||| ||| | | | Sbjct 558 GCAAGACAGACAAGTCGAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTCCCGTGT 499 Query 298 GGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 498 GGAAGGGCCATCGCTCAACGGATAAAAGGTACGCCGGGGATA 457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 978957080960