Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq207837 423 6e-116 seq145936 423 6e-116 seq91336 399 7e-109 seq99405 306 1e-80 seq3489 266 1e-68 seq98401 259 2e-66 seq276914 223 1e-55 seq70310 152 2e-34 seq88858 89.7 2e-15 seq259159 80.6 9e-13 >seq207837 Length=1616 Score = 423 bits (468), Expect = 6e-116 Identities = 248/256 (97%), Gaps = 1/256 (0%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 439 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 498 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| Sbjct 499 TGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATG 558 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 559 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 618 Query 459 CCGTTTA-CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 619 CCGTTTACCCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 678 Query 518 TCACATTGCGTCAACA 533 |||||| |||||||| Sbjct 679 TCACATCACGTCAACA 694 Score = 118 bits (130), Expect = 3e-24 Identities = 103/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 7 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 66 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 67 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 121 Query 127 GGCCCGCG 134 || |||| Sbjct 122 GGGTCGCG 129 >seq145936 Length=4971 Score = 423 bits (468), Expect = 6e-116 Identities = 272/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | ||||| |||||||||||| Sbjct 2476 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACTGTGCCAGACTAAAGTCAAGCTCAA 2535 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2536 CAGGATCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTTGCTGC 2595 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| | Sbjct 2596 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGTGTCACTAATTAGAAG 2655 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 2656 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTTCCGTTTACACGCGCTTCA 2715 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct 2716 TTGAATTTCTTCACTTTGACATTCAGAACACTGGGAAGAAATCACATCGCGTCAACA 2772 Score = 107 bits (118), Expect = 6e-21 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || |||| ||||||| |||| |||| | || |||||||||||| ||| Sbjct 2198 CTTTTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCCTAGGACACCTGCATTACT 2257 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| | ||||||| ||||||||||||||| || |||| Sbjct 2258 GTTTGACAGGTGTACTGCCCCAGTCAAACTCCCCACCTGGCACTGTC 2304 >seq91336 Length=11174 Score = 399 bits (442), Expect = 7e-109 Identities = 268/298 (90%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||| Sbjct 2466 TCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAAC 2407 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| || Sbjct 2406 AGGGTCTTCTTTGCCCGCTGATTCCATCAAGCCCGTTCCCTTGTCTGTGGTTTCGCTGGA 2347 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| || ||||||||||||||||||| |||||||||||||| ||| |||||||| || Sbjct 2346 TAGTAGGTACGGACAGTGGGAATCTCGTTCATCCATTCATGCGCATCATTAATTAGACGA 2287 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||| | Sbjct 2286 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGCCACTTACCCTTGCTTCAT 2227 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT--GCGTCAACA 533 |||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| Sbjct 2226 TGAATTTCTTCACTATGACATTCAGAGCACTGGGCAGAAATCACACTGGGCGTCAACA 2169 >seq99405 Length=7045 Score = 306 bits (338), Expect = 1e-80 Identities = 247/297 (83%), Gaps = 15/297 (5%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||| ||| ||||||||||||| ||| || | | |||||||||||||||||| Sbjct 4718 CTCCCACTTACTCTTCACCTCTCAAGTCTCTTCCCAGTGGCAGACTAGAGTCAAGCTCAA 4659 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||| ||| |||| | | |||||||||||||||||||||||||||||||| | Sbjct 4658 -AGGGTCCTCTA--CCCG--GCCTACGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCAGG 4604 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 | ||||||||||||||| |||||||||||| |||| ||||||||| |||||||| ||||| Sbjct 4603 ACAGTAGATAGGGACAGGGGGAATCTCGTTCATCCGTTCATGCGCATCACTAATCAGATG 4544 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||| |||||| ||||||| |||||| | |||| Sbjct 4543 ACGAGGCATTTGGCTACCTTGAGAGAG----------TCCCGCCCTTTACCTGTGCTTCA 4494 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||| ||||||||||||||| ||||||||||||| || |||||| Sbjct 4493 CGGAATTTCTTCACTTCGACATTCAGAGCACTAGGCAGAAATCACACGGCCTCAACA 4437 >seq3489 Length=38864 Score = 266 bits (294), Expect = 1e-68 Identities = 159/167 (95%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 ||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct 37093 GGGACTGTGGGAATCTCGTTCATCCATTCATGCACGTCACTAATTAGATGACGAGGCATT 37034 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 37033 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCTGCGCTTCATTGAATTTCT 36974 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 36973 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCACGTCAACA 36927 Score = 145 bits (160), Expect = 2e-32 Identities = 85/88 (97%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 ||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct 37348 GGGACTGTGGGAATCTCGTTCATCCATTCATGCACGTCACTAATTAGATGACGAGGCATT 37289 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACT 454 |||||||||||||||||||||||||||| Sbjct 37288 TGGCTACCTTAAGAGAGTCATAGTTACT 37261 >seq98401 Length=7130 Score = 259 bits (286), Expect = 2e-66 Identities = 166/180 (92%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||| ||||||||||||||||||| || ||||||||||| || ||||||||||||| Sbjct 369 GATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGTGCATCACTAATTAGAT 428 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATA--GTTACTCCCGCCGTTTACCCGCGCT 473 |||||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||| Sbjct 429 GACGAGGCATTTGGCTGCCTTAAGAGAGTCATAGTGTTACTCCCACCGTTTACCTGCGCT 488 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 489 TCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCATCAACA 548 >seq276914 Length=317 Score = 223 bits (246), Expect = 1e-55 Identities = 123/123 (100%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 317 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 258 Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 257 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 198 Query 541 CTG 543 ||| Sbjct 197 CTG 195 >seq70310 Length=17066 Score = 152 bits (168), Expect = 2e-34 Identities = 93/99 (94%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||| || |||||||| |||| |||||||||||||||||| Sbjct 15292 TTAAGAGAGTCATAGTTACTCCCACCATTTACCCGTGCTTCATTGAATTTCTTCACTTTG 15233 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||| ||||||| Sbjct 15232 ACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 15194 >seq88858 Length=7939 Score = 89.7 bits (98), Expect = 2e-15 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 410 TTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 469 |||||||| ||| ||||| ||| ||||||| | | | ||||||| || ||||||| Sbjct 6371 TTAGATGATGAGATATTTGACTATACTAAGAGACTAACATTTACTCCTACCTTTTACCCC 6312 Query 470 CGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 | ||| |||||||||||||||| ||||||| ||| || | |||||| |||| Sbjct 6311 CTCTTAATTGAATTTCTTCACTTCAACATTCATAGCTGTGAGTAGAAATAACAT 6258 >seq259159 Length=567 Score = 80.6 bits (88), Expect = 9e-13 Identities = 74/94 (79%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79 |||| ||||||| |||| |||| |||||| ||||||| |||| ||| | |||||| Sbjct 566 GGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGTACACCTGTGTTACCATTTGAAAGATGT 507 Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 || |||||| |||||||||||||| || |||| Sbjct 506 ACCACCCCAGTCAAACTCCCCACCTAGCACTGTC 473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1629469278080