Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq71208 107 8e-21 >seq71208 Length=22231620 Score = 107 bits (118), Expect = 8e-21 Identities = 82/97 (85%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 20659325 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGACGAAGCCAGAGGAAACTCTG 20659384 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATC 660 ||||||| | ||| || ||| |||||||||| || Sbjct 20659385 GTGGAGGTCCATAGCAGTCCTGATGTGCAAATCGGTC 20659421 Score = 107 bits (118), Expect = 8e-21 Identities = 82/97 (85%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 20660449 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGACGAAGCCAGAGGAAACTCTG 20660508 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATC 660 ||||||| | ||| || ||| |||||||||| || Sbjct 20660509 GTGGAGGTCCATAGCAGTCCTGATGTGCAAATCGGTC 20660545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078397041500