Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq64423 77.0 2e-12 seq67106 73.4 2e-11 >seq64423 Length=560 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| || |||||| | ||||||||||||||||||| Sbjct 525 CTCACTAAACCATC-CAATCGGTAGTA-GCAACGGGCAGTGTGTACAAAGGGCAGGGACT 468 Query 109 TAATACAACGCAAGCT 124 |||| |||| |||||| Sbjct 467 TAAT-CAACACAAGCT 453 >seq67106 Length=448 Score = 73.4 bits (80), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 5/78 (6%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG--GA 106 |||||||| |||| || ||||||||| |||||| || | |||||||||||||||| || Sbjct 32 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGTGCAGTGTGTACAAAGGGCAGGGAGA 89 Query 107 CGTAATACAACGCAAGCT 124 | |||| ||||||||||| Sbjct 90 CTTAAT-CAACGCAAGCT 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300589261400