Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq4113 316 5e-84 >seq4113 Length=1073 Score = 316 bits (350), Expect = 5e-84 Identities = 310/397 (78%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 ||| | ||||||| |||||||||||||||||||||||||||| | | ||||||||| || Sbjct 432 AAGGAACGGCTAAATACGTGCCAGCAGCCGCGGTAATACGTATGTTCCAAGCGTTATCCG 373 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGG 134 || ||| ||||||||||||| |||||| ||||| | |||| | | |||||| ||| | Sbjct 372 GATTTATTGGGCGTAAAGCGAGCGCAGACGGTTATTTAAGTCTGAAGTGAAAGCCCTCAG 313 Query 135 CTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAAT 194 || ||| |||||||| || | |||| | |||| ||||| ||||| |||||| Sbjct 312 CTCAACTGAGGAATTGCTTTGGAAACTGGATGACTTGAGTGCAGTAGAGGAAAGTGGAAC 253 Query 195 TCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCC 254 |||| ||||||| ||||||||||||||||| |||| |||||||| |||||||||| || Sbjct 252 TCCATGTGTAGCGGTGAAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTT 193 Query 255 CCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 314 |||| | ||||||| | | || |||||| ||||| ||||||||||||||||||||| Sbjct 192 TCTGGACTGTAACTGACGTTGAGGCTCGAAAGTGTGGGTAGCAAACAGGATTAGATACCC 133 Query 315 TGGTAGTCCACGCCCTAAACGATATCAACTAGTTG-TTGGGGATTTACTTCCTT-GGTAA 372 ||||||||||| || |||||||| |||| || ||| || ||| | |||| || Sbjct 132 TGGTAGTCCACACCGTAAACGATGAGTGCTAGGTGTTTGAGGGTTTCCGCCCTTAAGTGC 73 Query 373 CGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||||||||| | ||| ||||||||||| ||| Sbjct 72 CGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTAC 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289545462816