Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1489 161 1e-37 >seq1489 Length=2175 Score = 161 bits (178), Expect = 1e-37 Identities = 184/248 (74%), Gaps = 22/248 (9%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| || ||||| || ||| | | || ||| Sbjct 1779 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCCTATACGTCATCTTTCGATTTT-GCAG 1721 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| ||||||||||||| |||||| ||||| ||| | Sbjct 1720 AGACCTGTGTTTTTGATAAACAGTCGCTTGGGCCTATTCACTGCG----------GCTGA 1671 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 || | ||| |||||||||||||||||||||||||| |||||||||| Sbjct 1670 CCAAT--GGTCA---------GCACCCCTTCTCCCGAAGTTACGGGGTTATTTTGCCGAG 1622 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||||| | ||||| | || | |||||| || |||| | ||| |||||||||||| Sbjct 1621 TTCCTTAACGAGAGTTCGCTCGCTCACCTTAGGATGCTCTCCTCGACTACCTGTGTCGGT 1562 Query 241 TTACGGTA 248 || ||||| Sbjct 1561 TTGCGGTA 1554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694371551517