Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1489 120 3e-25 >seq1489 Length=2175 Score = 120 bits (132), Expect = 3e-25 Identities = 134/176 (76%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| ||||||| | || || |||||| | ||| ||| || || || Sbjct 1557 CGCAAACCGACACAGGTAGTCGAGGAGAGCATCCTAAGGTGAGCGAGCGAACTCTCG-TT 1615 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||| |||||| | |||| |||||||||||| || |||| | ||| | ||| Sbjct 1616 AAGGAACTCGGCAAAATAACCCCGTAACTTCGGGAGAAGGGGTGCTGACC----ATTGGT 1671 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||||| ||||||| ||| || |||||||| |||||||||||| || ||| || Sbjct 1672 CAGCCGCAGTGAATAGGCCCAAGCGACTGTTTATCAAAAACACAGGTCTCTGCAAA 1727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531178237566