Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq4113 203 7e-50 >seq4113 Length=1073 Score = 203 bits (224), Expect = 7e-50 Identities = 258/351 (74%), Gaps = 23/351 (7%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| | ||||| ||||| | |||||||||||| ||| || |||||||||||||||| Sbjct 498 TTTACGAGCCGAAACCCTTCAT-CACACACGCGGCGTTG-CTCCATCAGGCTTTCGCCCA 555 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| || |||||| ||||||||||||||||||||| ||| |||||||||||| ||| | Sbjct 556 TTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTATGGGCCGTGTCTCAGTCCCATT 615 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | ||||| |||||| | | || | ||| ||| ||||||||||||||||||||| Sbjct 616 GTGGCCGATCAGTCTCTCAACTCGGCTATGCATCATCGTCTTGGTGAGCCATTACCTCAC 675 Query 182 CAACTAGCTAATCCGACCTAGGCTCATC------TGATAGCGCAAGGCCC------GAAG 229 |||||| ||||| | | || |||| ||||||| || | | || Sbjct 676 CAACTAACTAATGCACCGCGGGACCATCTCTTAGTGATAGCAGAACCATCTTTTAAGTAG 735 Query 230 GTCCCCTGC--TTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTAT 287 || ||| || || || ||| |||||||||| || |||||| || ||||| Sbjct 736 CAACCATGCGGTTGCTATTGT------TATACGGTATTAGCATCTGTTTCCAAATGTTAT 789 Query 288 CCCCCACTACCAGGCA-GATTCCTAGGCATTACTCACCCGTCCGCCGCTCT 337 |||| ||| ||| | | |||| | | |||||||||||| |||| |||| Sbjct 790 CCCCTGCTAAGAGGTAGGTTTCCCACGTGTTACTCACCCGTTCGCCACTCT 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071954665120