Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3970 338 1e-90 seq57 84.2 4e-14 seq71 73.4 7e-11 >seq3970 Length=1057 Score = 338 bits (374), Expect = 1e-90 Identities = 255/295 (86%), Gaps = 5/295 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTC--GCCGGCTTCTT 77 || |||||||||||||| |||||||| || || || || ||| | | |||||| Sbjct 765 GAACGAGACCTTAACCTACTAAATAGTGCTGCTAGCATTTGCTGGTATAGTCA-CTTCTT 823 Query 78 AGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||| Sbjct 824 AGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 883 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||| Sbjct 884 TTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-ACCTTGG 942 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| |||| Sbjct 943 CCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTG 1002 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||||||||||||||| |||||||||||| ||||||||| |||||||||| Sbjct 1003 TTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTA 1057 >seq57 Length=14644473 Score = 84.2 bits (92), Expect = 4e-14 Identities = 78/95 (82%), Gaps = 3/95 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | || | |||| |||||||||||||||| Sbjct 3217578 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACTTGA-GATTGAC-CAATAACAGGTCTGTG 3217521 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 |||||||||||||| | |||| ||||| ||||||| Sbjct 3217520 ATGCCCTTAGATGTCCGGGGCTGCACGTGCGCTAC 3217486 >seq71 Length=12411934 Score = 73.4 bits (80), Expect = 7e-11 Identities = 76/100 (76%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| |||| || | |||||||||||| ||| | || |||||| || |||||| | Sbjct 7638812 TCGTGATGGGTATCCGGGATTGCAATTATTCCTCATGGACAAGGAATTCCCAGTAAGGGT 7638871 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||| ||| || ||||||| |||||||| ||| ||| Sbjct 7638872 GGGCCATAAGCTTGCATTGATTAAGTCCCTGCTCTTAGTA 7638911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947159942912