Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1489 309 1e-81 >seq1489 Length=2175 Score = 309 bits (342), Expect = 1e-81 Identities = 361/481 (75%), Gaps = 6/481 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | ||| | | ||| |||||||||||||||| |||||||| Sbjct 594 CGAGTCTGAATAGGGCGTCGAGTATGTAGTCGTATACCCGAAACCAAGTGACCTACCCAT 653 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| |||||||||||||| |||| ||||||| |||||||||| |||||||||| Sbjct 654 GTGCAGGGTGAAGGTGCGGTAAAACGCACTGGAGGCCCGAACCCACGTCTGTTGAAAAAG 713 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 |||||||| ||||||||| || |||| | || | |||||||| ||||||||||||| Sbjct 714 GCGGGGATGACGTGTGGGTAGCGGAGAAATTCCAATCGAACTTGGAGATAGCTGGTTCTC 773 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC-AAGTATCACCATCGGGGGTAGAGCACTGTTATG 239 ||||||| |||||| ||||| | || | || || |||||||||||||| Sbjct 774 TCCGAAATAGCTTTAGGGCTAGCCTCGGATGATGAATATTGGAGGTAGAGCACTGTTTGA 833 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||| ||| | ||||| || | ||||||||||||| || ||||| Sbjct 834 TCTAGGGGTCCATCTAGGATTACCGAAATCTGATAAACTCCGAATGC-CAAATATTTTAA 892 Query 300 CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTAT 359 ||||||| | | ||| |||| ||||| || ||| || | || ||| | Sbjct 893 TCCGGGAGTCAAACTGCGAGTGATAAGATCCGTAGTTGAAAGGGAAACAGCCCAGACCAC 952 Query 360 CAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGC 419 ||||||||| ||| || | ||| ||||| || || || || | ||||| ||||| | Sbjct 953 CAGCTAAGGTCCCAAAGTTTCAGTTAAGTGGAA--AAGGATGTGGGGTTGCTTAGACAAC 1010 Query 420 TAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGA 479 |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| Sbjct 1011 TAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAGTGCGTAATAGCTCACTAGTCGA 1069 Query 480 G 480 | Sbjct 1070 G 1070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689528546816