Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1489 269 9e-70 >seq1489 Length=2175 Score = 269 bits (298), Expect = 9e-70 Identities = 334/452 (74%), Gaps = 19/452 (4%) Strand=Plus/Minus Query 117 CCAGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGA-TA 175 ||||| ||||| ||| | | ||||||| || || ||| | || | ||||||| | Sbjct 2175 CCAGTCAAACTGCCCGACTGACACTGTCTCCCGACCGGATTACGGTCGCGGGTTAGAGTG 2116 Query 176 TCCACTACGGTCAGA---GTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGC 232 ||| |||| | || |||| || || | |||||| |||||||| | || Sbjct 2115 GCCAT----GTCACAAGGGTAGTATCCCACCAGTGCCTCCACCGAAACTAGCGTTCCGGC 2060 Query 233 ATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTG 292 ||| | |||| ||||||||| ||| | ||| || ||||| ||| || ||| Sbjct 2059 TTCAATGGCTCCTACCTATCCTGTACATGTCACACAGACACTCAATATCAACCTGCAGTA 2000 Query 293 AAGGTCCC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| ||| ||||||||| ||||||| |||| | ||| |||||||| ||| ||||| ||| Sbjct 1999 AAGCTCCATGGGGTCTTTCCGTCCTGTCGCGGGTAACCAGCATCTTCACTGGTACTACAA 1940 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGA 411 |||||||| | || | |||||||||| | |||||||||| ||||||| |||| || Sbjct 1939 TTTCACCGAGTCTCTCGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCAGA 1880 Query 412 ACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 1879 ACTTACCTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACT 1820 Query 472 GGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTC 531 |||||||||||| | ||| | | | |||| | | |||||||||||||| Sbjct 1819 GGGGCTTCAATT-CGTACCT---TCGCTA------ATGCTAAGCACTCCTCTTAACCTTC 1770 Query 532 CAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||||||||||| || ||||| || Sbjct 1769 CAGCACCGGGCAGGCGTCAGCCCCTATACGTC 1738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702328005504