Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jaculus_20jaculus_20[refseq_20GCF_5F000280705.1_202012-07-30] 10,898 sequences; 2,835,250,225 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq24 84.2 2e-14 >seq24 Length=31839276 Score = 84.2 bits (92), Expect = 2e-14 Identities = 84/107 (79%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG---CTCGAATACATTACCAT 69 || ||||||| || ||| ||| ||||||||||||||| | | |||||| | || Sbjct 7655590 TTGACTTTGACAATATTGGAGTGTTCAAAGCAGGCCTGAGCCACCTGAATACTGCAGCAA 7655531 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA 116 |||||||| ||||||||| | |||||||||||||| ||||| | ||| Sbjct 7655530 GGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTTTGGA 7655485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511945945920