Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11-
20] 14,543 sequences; 2,510,587,379 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq2305 176 2e-42
seq1 109 3e-22
seq5 100 1e-19
>seq2305
Length=4908
Score = 176 bits (194), Expect = 2e-42
Identities = 100/102 (98%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2347 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 2288
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 2287 CCGAATCCCCGCCCCTCGGTGGGGCGCGGGAAATGTGGCGTA 2246
>seq1
Length=90267253
Score = 109 bits (120), Expect = 3e-22
Identities = 74/83 (89%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76
||||||||||||||||| |||||| ||||||||||||||||| ||| ||||||| ||||
Sbjct 22070356 AGGATTCCCTCAGTAACTGCGAGTAAACAGGGAAGAGCCCAGTGCCAAATCCCCACCCCT 22070297
Query 77 CGGTGGGGCGCGGGACATGTGGC 99
| ||||||| ||||| |||||||
Sbjct 22070296 CAGTGGGGCACGGGAAATGTGGC 22070274
>seq5
Length=64221397
Score = 100 bits (110), Expect = 1e-19
Identities = 62/65 (95%), Gaps = 1/65 (2%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 57584263 GGAAAAGAAACTAAC-AGGATTCCCTCAGTAAGGGCAAGTGAACAGGGAAGAGCCCAGCG 57584205
Query 61 CCGAA 65
|||||
Sbjct 57584204 CCGAA 57584200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230368587120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |