Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Marmota_20marmota_20marmota_20[refseq_20GCF_5F001458135.1_202015-11-
20] 14,543 sequences; 2,510,587,379 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq1479 257 2e-66
>seq1479
Length=6407
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 6310 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 6251
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 6250 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 6192
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 6191 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 6132
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 6131 TTGGATTTATT 6121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511927866720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |