Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq240 82.4 1e-13 >seq240 Length=1425787 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| |||||||||||| | |||||| | ||||| || | || |||| || || | Sbjct 132198 GTATGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGAATGTGCTTGGCTGAGGAGCCAAT 132141 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||| ||||| |||||||| ||||| ||||||||||||||||| Sbjct 132140 GGGGCGAAGCTACTATCTGTGGGATTATGACTGAATACCTCTAAGTCAGAATCC 132087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819029502976