Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20agrestis_20[genbank_20GCA_5F001305995.1_202015-10-02] 230,202 sequences; 3,124,140,565 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1964 104 1e-20 >seq1964 Length=2808087 Score = 104 bits (114), Expect = 1e-20 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61 |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| || Sbjct 191579 GAAAAGAAACTAACCAGGATTCCCTCAGTAACAGTGAGTGAGCAGGGAAGAGCCCAGTGC 191638 Query 62 CGAATCCCCGCC 73 | |||||| ||| Sbjct 191639 CAAATCCCTGCC 191650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229902763680