Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20agrestis_20[genbank_20GCA_5F001305995.1_202015-10-02] 230,202 sequences; 3,124,140,565 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq101023 75.2 2e-11 seq97214 75.2 2e-11 >seq101023 Length=1438 Score = 75.2 bits (82), Expect = 2e-11 Identities = 51/56 (91%), Gaps = 1/56 (2%) Strand=Plus/Minus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 |||||||||||||||| |||||| | |||||||||||||||||||||||| |||| Sbjct 1425 GCGAAGCTACCATCTGTGGGATTACGACTGAACGCCTCTAAGTCAGAATCC-TGCC 1371 >seq97214 Length=1944 Score = 75.2 bits (82), Expect = 2e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 6 GCGAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817373116928