Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq233 78.8 1e-12 >seq233 Length=141111 Score = 78.8 bits (86), Expect = 1e-12 Identities = 79/101 (78%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 11577 AAACCAACAAAATAGAACTGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 11635 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 11636 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 11676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595163472390