Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28]
3,162 sequences; 2,553,112,587 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1625 167 1e-39
seq25 73.4 2e-11
>seq1625
Length=3763
Score = 167 bits (184), Expect = 1e-39
Identities = 108/117 (92%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || ||||||| ||||||||| ||
Sbjct 3626 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGCGTCAAAAA-ATAACATCGTCC 3568
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3567 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3511
>seq25
Length=158037523
Score = 73.4 bits (80), Expect = 2e-11
Identities = 85/115 (74%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| | ||| |||| || |||| |||| |||
Sbjct 71699573 GAACCCAAAGACTTTGGTTTCCTGGAAGCTGCCCCGCAGGTCATGGGAATAATGCCGCTG 71699632
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
||| | ||| ||| | ||||| ||| | |||||||||||||||||| ||||||
Sbjct 71699633 CATCACCAGTTGGCTTCGTTTATGGTCAGAACTACGACGGTATCTGATTGTCTTC 71699687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278391747180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |