Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28]
3,162 sequences; 2,553,112,587 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1258 141 2e-31
>seq1258
Length=28195
Score = 141 bits (156), Expect = 2e-31
Identities = 201/279 (72%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| |||||| ||| ||||||||||||||| | ||||||||
Sbjct 13985 TAAACTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 13926
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| |||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 13925 ATCGTTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 13866
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGT----TAGC 182
|| | | |||| ||||||| || ||||||| ||| |||| | | || ||
Sbjct 13865 CCCTCA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCAACATCAAATAGTATTATATT 13807
Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTT 241
||| || |||||| |||||||||||||| |||||| ||||| | | |||
Sbjct 13806 TAATTATCTCTGTTAACCAGCCGGCACCGGGCAGATATCACACTTTATACATAGATTTTT 13747
Query 242 CGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| ||| ||| ||||||||||||| | ||||||||||
Sbjct 13746 AATCTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 13708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260760133504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |