Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1258 111 5e-22 >seq1258 Length=28195 Score = 111 bits (122), Expect = 5e-22 Identities = 144/197 (73%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | | Sbjct 9330 GGGACTAAGACAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATGCC 9389 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTTC 414 | |||||| | |||||| | || || ||| |||| |||||| | | | | | || Sbjct 9390 TAAACAAAGAGATGCGAAAATGTGAATTCTAGCTAATCTCATAAAATAGGATATAAATTT 9449 Query 415 ---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCA 471 ||||||||||||| || ||||||||||||| || ||| ||||||||||| |||| Sbjct 9450 TAAGGATTGTAGTCTGAAATTCGACTATATGAATATGTAATTACTAGTAATCGTGAATCA 9509 Query 472 GCATGCTACGGTGAATA 488 |||| |||||||||| Sbjct 9510 CCATGTCACGGTGAATA 9526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503952443520