Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28]
3,162 sequences; 2,553,112,587 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq1625 154 2e-35
seq18 78.8 1e-12
>seq1625
Length=3763
Score = 154 bits (170), Expect = 2e-35
Identities = 151/192 (79%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct 3367 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATTATTCCATGCTAATGTATTCG 3308
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| |||||||||||| |||| | ||
Sbjct 3307 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGTCA 3248
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| |||| ||||| || ||| || | ||| | || |||||| |||
Sbjct 3247 CACCCAGTGAAGGGCATGAGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTACACGCG 3188
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 3187 GTGAGGCGGACC 3176
>seq18
Length=146158383
Score = 78.8 bits (86), Expect = 1e-12
Identities = 79/101 (78%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| ||| ||||||||| |||||||| ||| |||| | ||||
Sbjct 4162718 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 4162660
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
|||||||||||||||||||||| | |||| |||||
Sbjct 4162659 GCTCGGGCCTGCTTTGAACACTCTAATTCTTTCAAAGTAAA 4162619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595181767908
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |