Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28]
3,162 sequences; 2,553,112,587 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq1625 260 1e-67
seq18 82.4 8e-14
>seq1625
Length=3763
Score = 260 bits (288), Expect = 1e-67
Identities = 173/191 (91%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| | || | |||||||| ||||||||||
Sbjct 3254 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 3313
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||
Sbjct 3314 CATTAGCATGGAATAATGAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 3372
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 3373 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 3432
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 3433 TTGGATTTATT 3443
>seq18
Length=146158383
Score = 82.4 bits (90), Expect = 8e-14
Identities = 80/101 (79%), Gaps = 4/101 (4%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
|||||||||||| |||||||| |||||||||||||| || | |||| | |
Sbjct 4162619 TTTACTTTGAAAGAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 4162678
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
|||||||| ||||||||| ||||||||||||||| |||||
Sbjct 4162679 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT 4162718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511984316480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |