Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2800 789 0.0 seq6 455 1e-125 seq23 405 2e-110 seq9 376 8e-102 seq1 358 2e-96 seq11 349 1e-93 seq25 333 9e-89 seq997 329 1e-87 seq24 277 6e-72 seq3 190 7e-46 seq19 143 9e-32 seq16 132 2e-28 >seq2800 Length=3960 Score = 789 bits (874), Expect = 0.0 Identities = 498/537 (93%), Gaps = 5/537 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 3766 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 3707 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 3706 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 3647 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| | || |||| |||||||||||| Sbjct 3646 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACAA--AAATCCAGCCCCGCTTCATTGA 3589 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 3588 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 3532 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 3531 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 3472 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3471 TTTCCCCGCTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 3412 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3411 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 3352 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3351 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACT 3292 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3291 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 3235 >seq6 Length=112758220 Score = 455 bits (504), Expect = 1e-125 Identities = 279/297 (94%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 105844342 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 105844401 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||| | Sbjct 105844402 CAGGGTCTTCTTTCCCCACTGATTCCGCCAAGCCTGTTCCCTTGGCTATGGTTTCGCTGG 105844461 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 105844462 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 105844521 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 105844522 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAATTACTCCCGCCGTTTACCCGCGCTTCA 105844581 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 105844582 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 105844638 >seq23 Length=120012414 Score = 405 bits (448), Expect = 2e-110 Identities = 244/256 (95%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 76636592 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCAGCTGATTCCGCCAAGCCCGTTCCCT 76636533 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||| Sbjct 76636532 TGGCTGTGATTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATG 76636473 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT-ACTCCC 457 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 76636472 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACTTTAAGAGAGTCATAGTTAACTCCC 76636413 Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 76636412 GCCGTTTACCCACGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 76636353 Query 518 TCACATTGCGTCAACA 533 ||||| ||||||||| Sbjct 76636352 TCACAGCGCGTCAACA 76636337 Score = 138 bits (152), Expect = 4e-30 Identities = 148/196 (76%), Gaps = 16/196 (8%) Strand=Plus/Plus Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 ||||||| ||| ||||| || ||| |||||||||| || ||| ||||||| |||| Sbjct 117338255 GTGGTTTTGCTGGATAGCAGGTAGAGACAGTGGGATTCAGGTTCATCCATTTGTGCG--- 117338311 Query 404 CACTAATTAGATGACGAGGCATTT-GGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 |||| |||||||| |||||| ||| ||| | |||||||| ||| ||| | Sbjct 117338312 -----------TGACAAGGCATTTTGGCTACTTTAGGAGGGCCATAGTTATTCCTGCCAT 117338360 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 |||||| |||| |||||||||| ||||||| |||| |||||||||||||||||||| Sbjct 117338361 TTACCCAAGCTTCATTGAATTTCTATACTTTGATGTTCATAGCACTGGGCAGAAATCACA 117338420 Query 523 TTGCGTCAACATCACT 538 | | ||||| |||| Sbjct 117338421 TCCTGCCAACA-CACT 117338435 >seq9 Length=92629107 Score = 376 bits (416), Expect = 8e-102 Identities = 233/248 (94%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 5256911 CTCCCACTTAT-CTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 5256853 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 5256852 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTTGCTGG 5256793 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5256792 ATCGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 5256733 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 5256732 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCG 5256673 Query 477 TTGAATTT 484 |||||||| Sbjct 5256672 TTGAATTT 5256665 >seq1 Length=185492789 Score = 358 bits (396), Expect = 2e-96 Identities = 258/297 (87%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||| |||||||||| Sbjct 141054867 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCTTGCCAGACTAGCATCAAGCTCAA 141054926 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| |||||||| ||||||||| |||||||||||||| |||| || | Sbjct 141054927 CAGGGTCTTCTTTCCCAGCTGATTCTGCCAAGCCCATTCCCTTGGCTGTGCTTTCCCTGG 141054986 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||| | | ||||||||||||||| ||| |||||||| | | ||||||| ||||||| Sbjct 141054987 ATAGTTGGT--GGACAGTGGGAATCTGGTTCATCCATTCTTCCATGTCACTACTTAGATG 141055044 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || ||||||||||||||||||| ||||||||||||||||| | ||||||| | || | Sbjct 141055045 ACCAGGCATTTGGCTACCTTAAAAGAGTCATAGTTACTCCAGTGGTTTACCTGTGCCTCA 141055104 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 141055105 TTGAATTTGTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCTTCAACA 141055161 Score = 340 bits (376), Expect = 6e-91 Identities = 253/296 (85%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||| ||||||||||| ||| ||||| | | |||| |||||||| |||| Sbjct 141038892 CTCCCACTTATTTTACACCTCTCATGTCTCTTCACCGTGCCAGACTTGAGTCAAGTTCAA 141038833 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| |||||||| ||||||||| |||||||||||||| |||| || | Sbjct 141038832 CAGGGTCTTCTTTCCCAGCTGATTCTGCCAAGCCCTTTCCCTTGGCTGTGCTTTCCCTGG 141038773 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||| ||||||||||||| | |||||| ||| |||||||||||||| Sbjct 141038772 ATAGTAGGTAGGGAGAGTGGGAATCTCGCTCCTCCATTTTTGCTAGTCACTAATTAGATC 141038713 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || |||||||||||||||||||||||||||| |||||||| || ||||||| || ||| Sbjct 141038712 ACCAGGCATTTGGCTACCTTAAGAGAGTCATCGTTACTCCTGCAGTTTACCTGCTCTTCA 141038653 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 || ||||||||||||||||||||||||||||||||||| |||| | | ||||| Sbjct 141038652 TTTCATTTCTTCACTTTGACATTCAGAGCACTGGGCAGATTTCACTTCACCTCAAC 141038597 Score = 315 bits (348), Expect = 2e-83 Identities = 241/284 (85%), Gaps = 5/284 (2%) Strand=Plus/Minus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||| ||||||||||| ||| ||||| | | ||||||||||||||||||| Sbjct 141041831 TCCCACTTATTTTACACCTCTCATGTCTCTTCACCTTGCCAGACTAGAGTCAAGCTCAAC 141041772 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||| || || Sbjct 141041771 AGGGTCTTCTTTCCCAGCTGATTCTGCCAAGCCCTTTCCCTTGGTTGTGGTTTCTCTGGA 141041712 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| |||||||||||||||||| | | ||||| || || ||||||||||||| | Sbjct 141041711 TAGTAGGTAGGGACAGTGGGAATCTTGCTCCTCCAT---TGTGCCTCACTAATTAGATCA 141041655 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 | ||||||||| |||| ||| ||||||| ||||||| ||| |||||| || ||| | Sbjct 141041654 CAAGGCATTTGACTACATTA--AGAGTCAATTTTACTCCTGCCCTTTACCTGCTCTTCAT 141041597 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 || ||||||||||||||||||||||||||||||||||| | ||| Sbjct 141041596 TGCATTTCTTCACTTTGACATTCAGAGCACTGGGCAGATAACAC 141041553 Score = 282 bits (312), Expect = 1e-73 Identities = 190/215 (88%), Gaps = 13/215 (6%) Strand=Plus/Plus Query 319 TTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGA 378 ||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||| Sbjct 104191006 TTCCGCCAAGCCCGTTCCCTTGGCTTTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGA 104191065 Query 379 ATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAA 438 |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 104191066 ATCTCGTTCATCCATTCATGTGCGTCACTAATTAGATGATGAGGCATTTGGCTACCTTAA 104191125 Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 ||||||||||| ||||||| |||| ||||||||||||||||||| || Sbjct 104191126 GAGAGTCATAG-------------TTACCCGGGCTTCATTGAATTTCTTCACTTTGATAT 104191172 Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||| ||||||||| Sbjct 104191173 TCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 104191207 Score = 77.0 bits (84), Expect = 1e-11 Identities = 81/107 (76%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | ||| ||||||| || |||| | |||||||||||||| |||| Sbjct 141042098 CTTCTGCTCCAGGGGAACTTTCTGTCTTCTCTGAGCTCACCTTAGGACACCTGTGTTACC 141042039 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 | | |||| ||| | ||||||| || |||||||||||| || |||| Sbjct 141042038 TTCTGACAGGTGTACTGCCCCAGTCACACTCCCCACCTGGCACTGTC 141041992 >seq11 Length=89975685 Score = 349 bits (386), Expect = 1e-93 Identities = 402/539 (75%), Gaps = 29/539 (5%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 || |||||| |||||| ||||||| |||| |||| | ||||||||||||||| || Sbjct 18750607 TTCTGCTCTCCAGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGC--TACCA 18750550 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC----------ATCA 117 ||| ||| ||| | ||||||| ||||||||||||||| || |||| |||| Sbjct 18750549 TTTGGCAGGTGTACTGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCTGGAGAGAATCA 18750490 Query 118 ACCCGGATC-GGCCCGCGAAGGACCTTAACGCCA--GAAAATGGTCGGTGAAGACCAGTT 174 || | || || | |||| | | | || || || | | ||| Sbjct 18750489 TGCCTGCTCTGGGGCCAGAAGCAAG--AGCCCCTTGGAGCTTGTCCCCCGCCTCCCAACC 18750432 Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC 234 |||| ||| | | ||| |||||||||| || ||||||||||||||| | ||| Sbjct 18750431 CCGCCTCACCGGGTCAGTGAAAAAACGATGAGAGTAGTGGTATTTCACCAGTACCGGGG- 18750373 Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 | ||||||||||| || |||||||||||| ||||| || | |||||||||||| ||| Sbjct 18750372 GCCTCCCACTTATAATATACCTCTCAAGTCTCTTCACTGAGCCAGACTAGAGTCAAACTC 18750313 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 ||||||||||||||||||| |||||||| |||||| ||| ||||||||||| || ||| Sbjct 18750312 AACAGGGTCTTCTTTCCCCACTGATTCCTCCAAGCTTCTTCTCTTGGCTGTGGCTTTGCT 18750253 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 |||| ||| || ||||||||| ||||| ||| ||||||||||||||||||||||||| Sbjct 18750252 GGATAATAGGTATGGACAGTGGTAATCTTGTTCATCCATTCATGCGCGTCACTAATTA-- 18750195 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 |||||||||||||||||| |||||| ||| | | || |||||||| | ||| Sbjct 18750194 ---------ATTTGGCTACCTTAAGAGGGTCATATTTATTTCTGCTGTTTACCCCCACTT 18750144 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||| ||||||||| ||||||| ||||||||||| || | || |||| Sbjct 18750143 CATTGAATTTCTTCATTTTGACATTAAGAGCACGAGGCAGAAATCATATCGGGTTAACA 18750085 >seq25 Length=158037523 Score = 333 bits (368), Expect = 9e-89 Identities = 190/194 (98%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 281 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTG 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129799519 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTG 129799460 Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 129799459 GCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCG 129799400 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129799399 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCT 129799340 Query 461 GTTTACCCGCGCTT 474 |||||||||||||| Sbjct 129799339 GTTTACCCGCGCTT 129799326 >seq997 Length=100386 Score = 329 bits (364), Expect = 1e-87 Identities = 244/285 (86%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||| ||||| ||||| ||| ||||| | | |||| |||||||| |||| Sbjct 68198 CTCCCACTTATTTTACACTTCTCATGTCTCTTCACCTTGCCAGACTTGAGTCAAGATCAA 68257 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| |||||||| ||||||||| |||||||||||||| |||| || | Sbjct 68258 CAGGGTCTTCTTTCCCAGCTGATTCTGCCAAGCCCTTTCCCTTGGCTGTGCTTTCCCTGG 68317 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||| ||||||||||| | | |||||| ||| |||||||||||||| Sbjct 68318 ATAGTAGGTAGGGAGAGTGGGAATCTTGCTCCTCCATTTTTGCTAGTCACTAATTAGATC 68377 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || |||||||||||||||||||||||||||| |||||||| || ||||||| || ||| Sbjct 68378 ACCAGGCATTTGGCTACCTTAAGAGAGTCATCGTTACTCCTGCAGTTTACCTGCTCTTCA 68437 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 || ||||||||||||||||||||||||||||||||||| |||| Sbjct 68438 TTTCATTTCTTCACTTTGACATTCAGAGCACTGGGCAGATTTCAC 68482 >seq24 Length=120003353 Score = 277 bits (306), Expect = 6e-72 Identities = 195/220 (89%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||| ||||||||||||||||| ||| ||||| | | |||||||||||||| ||| Sbjct 119999406 CTCCCATTTATTCTACACCTCTCATGTCTCTTCACCTTGCCAGACTAGAGTCAAGC-CAA 119999348 Query 297 CAGGGTCTTCTTTCCCCGCTG-ATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 ||||||||||| || ||| ||||| ||||||| ||||||||||||||||||||||| Sbjct 119999347 CAGGGTCTTCTCCCCACGCCCCATTCCACCAAGCCTGTTCCCTTGGCTGTGGTTTCGCTG 119999288 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||| |||||||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct 119999287 GATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCACTGATGCGCGTCACTAATTAGAT 119999228 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 455 ||| |||||||||||||||||||||||||| ||||||||| Sbjct 119999227 GACAAGGCATTTGGCTACCTTAAGAGAGTCTTAGTTACTC 119999188 Score = 104 bits (114), Expect = 8e-20 Identities = 102/129 (79%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCG-TTAT 65 ||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||| ||| Sbjct 119999698 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTTAC 119999639 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 |||| |||| ||| | ||||||| || |||||||||||| || |||| || | ||| Sbjct 119999638 CGTTTGACAGGTGTACTGCCCCAGTCAGACTCCCCACCTGGCACTGTCCCCAGAGCAGAT 119999579 Query 126 CG-GCCCGC 133 || |||||| Sbjct 119999578 CGTGCCCGC 119999570 >seq3 Length=122627250 Score = 190 bits (210), Expect = 7e-46 Identities = 183/245 (75%), Gaps = 36/245 (15%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || |||||||||||||||| |||||||||| ||| |||||| || ||| |||| ||| || Sbjct 53046130 GAGTAGAGTCAAGCTCAACCGGGTCTTCTTCCCCTGCTGATCCCACCAGGCCCATTCGCT 53046071 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||||||||||||| | ||||| || | ||||| ||||||| ||| || Sbjct 53046070 TGGCTGTGGTTTCAGTGGATAGGAGGTGGGGACTGTGGGAACCTCCTT------------ 53046023 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 ||||||||| |||||||||||| ||||||||||||| Sbjct 53046022 ------------------------CATTTGGCTCCCTTAAGAGAGTGATAGTTACTCCCG 53045987 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 || |||||||| |||| ||||||||||||||||| ||| |||||||||||||||||||| Sbjct 53045986 CCATTTACCCGTGCTTCATTGAATTTCTTCACTTTCACACTCAGAGCACTGGGCAGAAAT 53045927 Query 519 CACAT 523 ||||| Sbjct 53045926 CACAT 53045922 >seq19 Length=145277780 Score = 143 bits (158), Expect = 9e-32 Identities = 123/153 (80%), Gaps = 13/153 (8%) Strand=Plus/Plus Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 ||||||| |||||||||||||||||| ||| ||||| | | ||||| |||||||||| Sbjct 107801533 GGCTCCCTCTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAAAGTCAAGCTC 107801592 Query 295 AA------CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 || | ||||| |||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 107801593 AAGCTCATCGGGGTCATCTTTCCCCGCTGATTCCACCAAGCCTGTTCCCTTGGCTGTGGT 107801652 Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATC 381 ||| | | |||||||||||||| |||| Sbjct 107801653 TTC-------ACTGGATAGGGACAGTGGAAATC 107801678 >seq16 Length=152576986 Score = 132 bits (146), Expect = 2e-28 Identities = 139/186 (75%), Gaps = 19/186 (10%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 ||||||||||||||| || | ||||| | ||| |||||||| ||||| || |||||| Sbjct 11606636 GACTAGAGTCAAGCTAAATAAAGTCTTTT---CCCACTGATTCCACCAAGTCCTTTCCCT 11606580 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 | | |||||||||||||||| |||| || ||| || |||||||| Sbjct 11606579 GG----------------AGAGTAGATAGGGACAGTAGGAAACTTGTTTATTCATTCATG 11606536 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 | |||| ||||||| | || ||||||||| || ||||||||||||||||||||||| | Sbjct 11606535 TGGGTCATTAATTAGGTAACAAGGCATTTGACTGTCTTAAGAGAGTCATAGTTACTCCTG 11606476 Query 459 CCGTTT 464 | ||| Sbjct 11606475 ACCTTT 11606470 Score = 107 bits (118), Expect = 6e-21 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| |||| || |||| |||| ||||||||||||||||| ||| Sbjct 144851872 CTTCTGCTCCACGGGAGGTTTCCGTCCTCCCTGAGCTCCCCTTAGGACACCTGCATTACC 144851813 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108 |||| |||| ||| ||||||||| ||||||||||||||| || Sbjct 144851812 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCA 144851771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635148294976