Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29]
207 sequences; 2,807,715,301 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq34 82.4 9e-14
seq22 82.4 9e-14
seq37 73.4 5e-11
>seq34
Length=94987271
Score = 82.4 bits (90), Expect = 9e-14
Identities = 80/101 (79%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| ||| ||||||||| |||||||| ||| |||| | ||||
Sbjct 39847257 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 39847199
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
|||||||||||||||||||||||| |||| |||||
Sbjct 39847198 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 39847158
>seq22
Length=149736546
Score = 82.4 bits (90), Expect = 9e-14
Identities = 82/102 (80%), Gaps = 6/102 (6%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68
||||||||||||||| || |||| |||||||| |||||||| ||| |||| | |||
Sbjct 3201346 AAACCAACAAAATAGA-AC-CACGGTCCTATTCCATTATTCCTAGCTGCAGTATCCAGGC 3201289
Query 69 GTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
| |||||||||||||||||||||||| |||| |||||
Sbjct 3201288 GGCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 3201247
>seq37
Length=171031299
Score = 73.4 bits (80), Expect = 5e-11
Identities = 78/101 (77%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||| ||||||| ||| ||||||||| ||||||| ||| |||| | ||||
Sbjct 24008730 AAACCAATAAAATAGAACCGCG-GTCCTATTCCATTATTCTTAGCTGTGGTATCCAGGCG 24008672
Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
| |||||||||||| ||||||||||| |||| |||||
Sbjct 24008671 GCTTGGGCCTGCTTTGAATACTCTAATTTTTTCAAAGTAAA 24008631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595198806438
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |