Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20pahari_20[refseq_20GCF_5F900095145.1_202017-04-28] 2,581 sequences; 2,475,012,951 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq10 141 2e-31 >seq10 Length=113323912 Score = 141 bits (156), Expect = 2e-31 Identities = 191/265 (72%), Gaps = 22/265 (8%) Strand=Plus/Minus Query 53 GTGTGCCGGGGAGCCAGGA--CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC- 109 |||| ||| || ||| || | |||||||||||||||||||||||||||||||||||| Sbjct 105668696 GTGTCCCGCGGGGCCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCC 105668637 Query 110 --TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTG 167 || | |||| ||| |||||||| ||||||||| ||||||||||||||||| Sbjct 105668636 AAGCCGCCTGGATACCGCAGCTGGGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTG 105668578 Query 168 GTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTC 227 |||| | || | | |||||||| ||||| | |||||| | ||||| | Sbjct 105668577 GTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCT 105668518 Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 ||||||||||||||||| || |||||||| || ||||| ||| Sbjct 105668517 AGAGGTGAAATTCTTGG---------------ACCGGCGCGAAAGCATTTGCCAAGAATG 105668473 Query 288 TTTTCATTAATCAGTGAACGAAAGT 312 ||||||||||||| |||||||||| Sbjct 105668472 TTTTCATTAATCA-AGAACGAAAGT 105668449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915176378688