Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20pahari_20[refseq_20GCF_5F900095145.1_202017-04-28] 2,581 sequences; 2,475,012,951 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq19 428 1e-117 seq2 425 2e-116 seq11 398 2e-108 seq2478 389 1e-105 seq9 383 5e-104 seq25 381 2e-103 seq12 304 4e-80 seq1934 280 5e-73 seq2014 253 7e-65 seq938 170 6e-40 seq1 168 2e-39 seq27 165 3e-38 seq1765 102 3e-19 seq4 100 9e-19 >seq19 Length=82564344 Score = 428 bits (474), Expect = 1e-117 Identities = 273/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 60118558 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACNGTGCCAGACTAGAGTCAAGCTCAA 60118499 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| || | Sbjct 60118498 CAGGGTCTTCTTTCCCTGCTGATTCCTCCAAGCCCATTCCCTTGGCTGTGGTTTCTCTGG 60118439 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct 60118438 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGTGCGTCACTAATTAGATG 60118379 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 60118378 ATGAGGCATTTGGCTACCTTAAGAAAGTCATAGTTACTCCCGCTGTTTACCCGCGCTTCA 60118319 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 60118318 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCCCGTCAACA 60118262 >seq2 Length=163939365 Score = 425 bits (470), Expect = 2e-116 Identities = 275/300 (92%), Gaps = 1/300 (0%) Strand=Plus/Minus Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 ||||||||||||||||| |||||||| ||| || || | | | |||||||||||||| Sbjct 139768013 GGCTCCCACTTATTCTATACCTCTCATGTCTCTTTACTGTGACAGTCTAGAGTCAAGCTC 139767954 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 139767953 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 139767894 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||| Sbjct 139767893 GGATAGTAGATAGGGACAGTAGGAATCTTGTTCAACCATTCATGCGCGTCACTAATTAGA 139767834 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTA-CTCCCGCCGTTTACCCGCGCT 473 |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| || Sbjct 139767833 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATATTTATTTCCTGCCGTTTACCCGCACT 139767774 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 139767773 TCATTGAATTTCTTTACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 139767714 Score = 104 bits (114), Expect = 8e-20 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| ||||||||||||||| ||| Sbjct 139768313 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGGACACCTGCTTTACC 139768254 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| | ||||||| ||||||||||||||| || |||| Sbjct 139768253 GTTTGACAGGTGTACNGCCCCAGTCAAACTCCCCACCTGGCACTGTC 139768207 Score = 98.7 bits (108), Expect = 3e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| ||||||||||| || |||| Sbjct 4469313 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGGACACTTGTGTTACC 4469372 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 4469373 TTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 4469419 >seq11 Length=111406228 Score = 398 bits (440), Expect = 2e-108 Identities = 269/299 (90%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | |||||||||||||||||| Sbjct 106461723 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACTGTGCTAGACTAGAGTCAAGCTCAA 106461782 Query 297 CAGGG-TCTT-CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 | | |||| |||||||| |||||||| |||||||| |||| ||||||||||||||||| Sbjct 106461783 CTTGACTCTTTCTTTCCCCACTGATTCCACCAAGCCCATTCCTTTGGCTGTGGTTTCGCT 106461842 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 |||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct 106461843 GGATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGTGCGTCACTAATTAGA 106461902 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||| Sbjct 106461903 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGCCATTTACCCATGCTT 106461962 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 106461963 CATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 106462021 >seq2478 Length=66424 Score = 389 bits (430), Expect = 1e-105 Identities = 265/297 (89%), Gaps = 1/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||| |||||| || ||||| ||| ||||| | | ||||| ||||||| |||| Sbjct 32193 CTCCCACTCATTCTATACTTCTCAGGTCTCTTCACTGTGCCAGACTAAAGTCAAGGTCAA 32252 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 | |||||||||||||| | |||||||||||||||||||||||||||||||||||| || | Sbjct 32253 CTGGGTCTTCTTTCCCTGTTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCACTGG 32312 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 | ||||| |||||||||||||||||||||| |||| |||||| || |||| ||||||||| Sbjct 32313 ACAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCCTTCATGAGCATCACGAATTAGATG 32372 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32373 ACAAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 32432 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| |||||| | ||||||| Sbjct 32433 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGATATCACA-TCTGTCAACA 32488 >seq9 Length=107150856 Score = 383 bits (424), Expect = 5e-104 Identities = 266/301 (88%), Gaps = 8/301 (3%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 34824189 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 34824248 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| ||||||||| || ||||||| |||||||||| |||||| || Sbjct 34824249 CAGGGTCTTCTTTCCCTGCTGATTCCACCGAGCCCGTGCCCTTGGCTGAGGTTTCACTGC 34824308 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 34824309 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATACATTCATGCGCGTCACTAATTAGATG 34824368 Query 417 ACGAGGC----ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472 || |||| ||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 34824369 ACAAGGCATTTATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCATTTACCCGTGC 34824428 Query 473 TTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 || |||| |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 34824429 TTCATTGA----TTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCATCAAC 34824484 Query 533 A 533 | Sbjct 34824485 A 34824485 >seq25 Length=55716805 Score = 381 bits (422), Expect = 2e-103 Identities = 258/288 (90%), Gaps = 1/288 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 17885073 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 17885014 Query 297 CAGGGTCTTCTTTCCCCG-CTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 ||||||||||||||||| |||||||| ||||||| || |||||||||||||| ||| Sbjct 17885013 CAGGGTCTTCTTTCCCCCACTGATTCCTCCAAGCCTCTTTTCTTGGCTGTGGTTTTACTA 17884954 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 || | ||| || ||| ||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 17884953 GACAATAGGTATGGATAGTGGTAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGAT 17884894 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17884893 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTC 17884834 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 ||||||||||||||||||||||| ||||||| ||||||||||| || Sbjct 17884833 ATTGAATTTCTTCACTTTGACATTAGGAGCACTAGGCAGAAATCATAT 17884786 Score = 107 bits (118), Expect = 6e-21 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 25 TTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGC 84 |||||||||||| |||| | ||||||||||||||||||| |||| |||| ||| |||| Sbjct 17885330 TTTCTGTTCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACCGTTTGACAGGTGTACCGC 17885271 Query 85 CCCAGCCAAACTCCCCACCTGACAATGTC 113 ||||| ||||||||||||||| || |||| Sbjct 17885270 CCCAGTCAAACTCCCCACCTGGCACTGTC 17885242 >seq12 Length=92399829 Score = 304 bits (336), Expect = 4e-80 Identities = 217/247 (88%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||| Sbjct 23936097 GAGTAGAGTCAAGCTCAATGGGGTCTTCTTTCCCTGCTGATTCCACCAGGCCCGTTCCCG 23936038 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||||||||||||| | |||||||| ||| ||||||||||||||| || ||||||||||| Sbjct 23936037 TGGCTGTGGTTTCAGTGGATAGTAGGTAGAGACAGTGGGAATCTCCTTCATCCATTCATG 23935978 Query 399 CGCGTCACTAATTAGAT-GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457 ||||||||| || || ||||||||||||||||||||||||||| |||||||||||||| Sbjct 23935977 TGCGTCACTAGATAAATGGACGAGGCATTTGGCTACCTTAAGAGATTCATAGTTACTCCC 23935918 Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC-AGAGCACTGGGCAGAA 516 ||| |||| | | |||| |||||| |||||||||||||| || |||||| ||||||||| Sbjct 23935917 GCCATTTATCTGTGCTTCATTGAATGTCTTCACTTTGACACTCAAGAGCAATGGGCAGAA 23935858 Query 517 ATCACAT 523 ||||||| Sbjct 23935857 ATCACAT 23935851 Score = 271 bits (300), Expect = 2e-70 Identities = 232/286 (81%), Gaps = 9/286 (3%) Strand=Plus/Plus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 || ||||||| |||||||||||| ||| |||| | || |||||||||||||||| || Sbjct 142806 TCGCACTTATGCTACACCTCTCATGTCTCTTCAAAGTGTGAGACTAGAGTCAAGCTCGAC 142865 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 || ||||||||||| ||||||||| |||| | ||||||||||||| ||||| | | Sbjct 142866 AGAGTCTTCTTTCCT-GCTGATTCCATCAAGTCTTTTCCCTTGGCTGTAGTTTCTTTGG- 142923 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| || |||||||| || |||||||||||| ||||||| ||| ||| Sbjct 142924 -------TAGGGATGGTAGGAATCTCCTTCATCCATTCATGCATATCACTAACTAGGTGA 142976 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 | ||||||||||||||||||||||||||||||||||||| | | |||||| | ||| Sbjct 142977 CTAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGTCATTTACCTGTCCTTCAA 143036 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 || ||||||||||||||||||||||||||||||| |||| |||||| Sbjct 143037 TGCATTTCTTCACTTTGACATTCAGAGCACTGGGAAGAAGTCACAT 143082 Score = 78.8 bits (86), Expect = 3e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 ||||||| | ||| ||||||||||||||||||||| ||||||||||||||| |||||| Sbjct 17380976 TTTACCCACACTTCATTGAATTTCTTCACTTTGACACCCAGAGCACTGGGCAGTAATCAC 17381035 Query 522 A 522 | Sbjct 17381036 A 17381036 >seq1934 Length=23875 Score = 280 bits (310), Expect = 5e-73 Identities = 232/283 (82%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| |||| | || ||||||||||||||| | Sbjct 2735 CTCCCACTTATTCTACACCTCTCATGTCTCTTCATAGTGTGAGACTAGAGTCAAGCTTGA 2676 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| |||||||| |||||| ||||||||||||| || || | Sbjct 2675 CAGGGTCTTCTTTCCC-GCTGATTCTATCAAGCCTTTTCCCTTGGCTGTAGTCTCTTT-- 2619 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||| | ||||||||||||||| || || ||||||||| | ||||||| ||| || Sbjct 2618 ------GATTGTGACAGTGGGAATCTCCTTTATTCATTCATGCACATCACTAACTAGGTG 2565 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | |||||||||||||||||||||||||||||| ||||||| ||| |||| | | |||| Sbjct 2564 ATGAGGCATTTGGCTACCTTAAGAGAGTCATACTTACTCCTGCCATTTAGCTGTGCTTCA 2505 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 ||| ||||||||||||||||||||||||||| || |||| || Sbjct 2504 TTGCATTTCTTCACTTTGACATTCAGAGCACCAGGAAGAAGTC 2462 >seq2014 Length=18058 Score = 253 bits (280), Expect = 7e-65 Identities = 234/294 (80%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||| ||||||| || ||||| || |||| | | ||||||| ||||| ||| Sbjct 8801 CTCCCAGCTATTCTATACTTCTCATATCTCTTCAGCATTCCAGACTAGATGCAAGCACAA 8860 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||| ||||||||| | | ||||| ||||||||| ||||||||||| ||| ||| || | Sbjct 8861 CAGGATCTTCTTTCACTGATGATTTAGCCAAGCCCATTCCCTTGGCTCTGGATTCACTGG 8920 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 || || | ||||||| ||||||| ||| || ||| | | |||||||| ||||||| Sbjct 8921 ATCACAGGGATGGACAGTAGGAATCTTGTTCATATATT-TTCCACGTCACTAGTTAGATG 8979 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | ||||||||||||||| |||||||||||||| | ||| ||| ||||||| |||| Sbjct 8980 ATGAGGCATTTGGCTACATTAAGAGAGTCATACTCACTGTGGCCATTTACCCATGCTTCA 9039 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530 ||||| |||||||||||||||||||||||||||||||| |||||||| | |||| Sbjct 9040 TTGAA-TTCTTCACTTTGACATTCAGAGCACTGGGCAGTAATCACATAGTGTCA 9092 >seq938 Length=79613 Score = 170 bits (188), Expect = 6e-40 Identities = 119/136 (88%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 || ||||||||||||| || ||||||||||||||||||||||||||| ||||||||| || Sbjct 30876 GCATCACTAATTAGATAACAAGGCATTTGGCTACCTTAAGAGAGTCACAGTTACTCCTGC 30817 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 | ||||||| |||| ||||||||||| ||||||||||| | |||||| |||||||||| Sbjct 30816 CATTTACCCAAGCTTCATTGAATTTCTTTACTTTGACATTTANAGCACTAGGCAGAAATC 30757 Query 520 ACATTGCGTCAACATC 535 |||| ||| |||||| Sbjct 30756 ACATCTCGTTAACATC 30741 >seq1 Length=172151128 Score = 168 bits (186), Expect = 2e-39 Identities = 110/121 (91%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || Sbjct 125432336 TCACTAATTAGATGACAAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACTGT 125432277 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 ||| | | |||| ||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct 125432276 TTATCTGAGCTTCATTGAATTTCTTTACTTTGACATTTAGAGCACTAGGCAGAAATCACA 125432217 Query 523 T 523 | Sbjct 125432216 T 125432216 Score = 168 bits (186), Expect = 2e-39 Identities = 110/121 (91%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || Sbjct 125487965 TCACTAATTAGATGACAAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACTGT 125487906 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 ||| | | |||| ||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct 125487905 TTATCTGAGCTTCATTGAATTTCTTTACTTTGACATTTAGAGCACTAGGCAGAAATCACA 125487846 Query 523 T 523 | Sbjct 125487845 T 125487845 Score = 168 bits (186), Expect = 2e-39 Identities = 110/121 (91%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || Sbjct 125521821 TCACTAATTAGATGACAAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACTGT 125521762 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 ||| | | |||| ||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct 125521761 TTATCTGAGCTTCATTGAATTTCTTTACTTTGACATTTAGAGCACTAGGCAGAAATCACA 125521702 Query 523 T 523 | Sbjct 125521701 T 125521701 Score = 168 bits (186), Expect = 2e-39 Identities = 110/121 (91%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || Sbjct 125534735 TCACTAATTAGATGACAAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACTGT 125534676 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 ||| | | |||| ||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct 125534675 TTATCTGAGCTTCATTGAATTTCTTTACTTTGACATTTAGAGCACTAGGCAGAAATCACA 125534616 Query 523 T 523 | Sbjct 125534615 T 125534615 >seq27 Length=41896614 Score = 165 bits (182), Expect = 3e-38 Identities = 137/167 (82%), Gaps = 9/167 (5%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||| |||| |||||||| ||| || | | | | ||||||| |||||||||| Sbjct 5887330 CTCCCACTTACTCTATACCTCTCATGTCTCTTTGCCATGCCAGACTAGATTCAAGCTCAA 5887389 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct 5887390 CAGGGTCATCTTTCCGCGCTGATTCCGCCAAGCCCATTCCCTTGGCTGTGGTTTCGC--- 5887446 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 | ||| |||| |||||||||| ||| ||||||| ||||||| Sbjct 5887447 ----TGGATGGGGATGGTGGGAATCTTGTTCATCCATT--TGCGCGT 5887487 Score = 141 bits (156), Expect = 3e-31 Identities = 125/159 (79%), Gaps = 13/159 (8%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||| ||||||| || ||| | | | | ||||||| |||||||||| Sbjct 3188981 CTCCCACTTATTCTACTCCTCTCATGTATCTTCGCCATGCCAGACTAGATTCAAGCTCAA 3188922 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||| ||||||| ||||||||| ||||||||| ||||||||||||| ||||||| Sbjct 3188921 CAGGGTCATCTTTCCGCGCTGATTCTGCCAAGCCCATTCCCTTGGCTGTCATTTCGCT-- 3188864 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395 ||| |||||||||| ||| |||||||| Sbjct 3188863 -----------GGATGGTGGGAATCTTGTTCATCCATTC 3188836 Score = 87.8 bits (96), Expect = 6e-15 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 5887294 ATTTCTTCACATTGACCTTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 5887242 Score = 78.8 bits (86), Expect = 3e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct 3189018 ATTTCTTCACATTGACCTTCAGAGCACTGGGCAGAAATCACATTGCTCCAACA 3189070 >seq1765 Length=48960 Score = 102 bits (112), Expect = 3e-19 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 || || |||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 29336 TGTGCATCACTAATTAGATGACAAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 29395 Query 457 CGCCGT 462 ||||| Sbjct 29396 TGCCGT 29401 >seq4 Length=164141553 Score = 100 bits (110), Expect = 9e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 24533570 GCGCATCACTAATTAGATGACAAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 24533511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635157795488