Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26]
5,404 sequences; 2,625,587,472 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 1e-31
seq2 77.0 1e-12
>seq1
Length=198846266
Score = 140 bits (154), Expect = 1e-31
Identities = 92/102 (90%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 56768649 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACTGCGAGTGAACAGGGAAGAGCCAAGCG 56768590
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||| || | | |||| |||| ||||||| ||
Sbjct 56768589 CCGAATCCCCGCCGCGTGTCGCGGCGTGGGAAATGTGGCATA 56768548
>seq2
Length=131945496
Score = 77.0 bits (84), Expect = 1e-12
Identities = 60/72 (83%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61
||||||||||||||||| |||||||||| | | ||||||||||||||||||| || |
Sbjct 49654547 GAAAAGAAACTAACCAGCATTCCCTCAGGCAAGATGAGTGAACAGGGAAGAGCCTGGCAC 49654488
Query 62 CGAATCCCCGCC 73
|||| ||| ||
Sbjct 49654487 TGAATTCCCACC 49654476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230388327360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |