Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq29242 77.0 4e-12 >seq29242 Length=106423 Score = 77.0 bits (84), Expect = 4e-12 Identities = 75/95 (79%), Gaps = 4/95 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| |||| ||||||||| |||||||| | | |||| | || | Sbjct 106010 AAACCAACAAAATAGAACCGCA-GTCCTATTCCATTATTCCTAGTTGTGGTATCCAGGAG 106068 Query 70 T---AAGCCTGCTTTGAACACTCTAATTTTCTCAA 101 | |||||||||||||||||||||||| |||| Sbjct 106069 GCTCAGGCCTGCTTTGAACACTCTAATTTTTTCAA 106103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593082482628