Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannospalax_20galili_20[refseq_20GCF_5F000622305.1_202014-06-05] 154,976 sequences; 3,061,424,619 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq33233 100 5e-19 >seq33233 Length=1596942 Score = 100 bits (110), Expect = 5e-19 Identities = 129/173 (75%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199 ||||||||| | ||||||||||||||||||| || || | | ||| |||| ||||| Sbjct 698383 GAATAGGACC-GAGGTTCTATTTTGTTGGTTTTCAGAACTGAGGCCATGTTTAAGAGGGA 698441 Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259 | | ||| | |||| |||| || |||||||||||||||||| | ||||| Sbjct 698442 T-GACGGAGCAGTCA-TATTGCGCTGCTAGAGGTGAAATTCTTGGACCAGTGCAAGACGG 698499 Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || | || ||||| || ||||| |||||||||||||||| ||| |||||| Sbjct 698500 ACCAGAGCAAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAATGAAAGT 698551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913781659648