Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannospalax_20galili_20[refseq_20GCF_5F000622305.1_202014-06-05] 154,976 sequences; 3,061,424,619 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq33500 80.6 1e-13 seq32860 77.0 1e-12 >seq33500 Length=4672267 Score = 80.6 bits (88), Expect = 1e-13 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||||||||||||||||||||||||||||||| || ||||||||||||||||| | | Sbjct 4630458 AAAAGAAACTAACCAGGATTCCCTCAGTAACTTTGAAAGAACAGGGAAGAGCCCAACACT 4630517 Query 63 GAAT 66 |||| Sbjct 4630518 GAAT 4630521 >seq32860 Length=4479289 Score = 77.0 bits (84), Expect = 1e-12 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||||||||| ||| | |||||||||||| |||||| Sbjct 1617362 GGAAAAGAAACTAACTAGGATTTCCTCAGTAATGGCAAAGGAACAGGGAAGA-CCCAGC- 1617419 Query 61 CCGAATCCC 69 |||||||| Sbjct 1617420 ACGAATCCC 1617428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230065251840