Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01]
7,135 sequences; 2,995,889,303 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq164 77.0 2e-12
>seq164
Length=5921534
Score = 77.0 bits (84), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || | |||||| |||| |||||| |||||||||||||||||||
Sbjct 116781 CTCACTAAACCATC-CAAACCGTAGTA-GCGATGGGCGGTGTGTACAAAGGGCAGGGACT 116838
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 116839 TAAT-CAACGCAAGCT 116853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300779879300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |