Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2163 749 0.0 seq438 497 3e-138 seq647 473 4e-131 seq100 450 4e-124 seq7 181 3e-43 seq2 179 1e-42 seq64 159 1e-36 seq3 158 4e-36 seq16 127 7e-27 seq12 102 3e-19 seq2099 93.3 1e-16 seq1633 87.8 6e-15 seq13 87.8 6e-15 seq321 84.2 7e-14 seq172 84.2 7e-14 seq141 84.2 7e-14 seq114 84.2 7e-14 seq1 84.2 7e-14 seq1139 82.4 2e-13 seq8 82.4 2e-13 seq67 80.6 9e-13 seq60 80.6 9e-13 seq11 80.6 9e-13 seq6 80.6 9e-13 seq380 78.8 3e-12 seq213 77.0 1e-11 seq185 77.0 1e-11 seq10 77.0 1e-11 seq3124 75.2 4e-11 seq2282 75.2 4e-11 >seq2163 Length=9074 Score = 749 bits (830), Expect = 0.0 Identities = 491/538 (91%), Gaps = 5/538 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1352 CTTTTGTTCTACTTGAGATTTCTGTTCTCAATGAGTCCCCCTTAGGACACCTGCGTTATT 1411 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 1412 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCAGATC 1471 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| ||||||||||| | | ||| ||| || || |||| || |||||||||| Sbjct 1472 AGCCCAAAAAGGACCTTAATACTAAAAAGTGGGATGTTAATCCCAGCTCTGCTTCATTGA 1531 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||| || |||| ||||||||||||||||| |||| | ||||||||||| Sbjct 1532 ATAAGTAAAAAGACAATAAAGGTAGTGGTATTTCACTGGCGCTTAC---GCTCCCACTTA 1588 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 ||||||| ||||| | ||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 1589 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 1647 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1648 CTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 1707 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1708 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 1767 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1768 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 1827 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 1828 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACACCACTTTCTG 1885 >seq438 Length=171919 Score = 497 bits (550), Expect = 3e-138 Identities = 461/592 (78%), Gaps = 67/592 (11%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 79883 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 79942 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAA-------- 118 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | Sbjct 79943 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGTCG 80002 Query 119 --CCCGGAT-----CGGCCCGCGAAG---GAC-----------CTTAACGCCAGAAAATG 157 ||||| ||||||||| | ||| ||| |||||||| Sbjct 80003 CGCCCGGCCGCCGCCGGCCCGCGCGGACCGACGGGGCCCGGCGCTTGGCGCCAGAAGCGA 80062 Query 158 G------TCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAG 211 | |||| | || |||| ||| | | ||| ||||||||||||| |||| Sbjct 80063 GAGCCCCTCGGGCTCGCCCCC--CCGCCTCACCGGGTCAGTGAAAAAACGATAAGAGTAG 80120 Query 212 TGGTATTTCACTTGCG------CCGAAA--------------------CGG----CTCCC 241 ||||||||||| ||| ||| | ||| ||||| Sbjct 80121 TGGTATTTCACCGGCGGCTGGCCCGCCAGTGAGGGGGCGGGAGGGCGCCGGGGGCCTCCC 80180 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 ||||||||||||||||||| ||| ||||| | | ||||||||||||||||||||||| Sbjct 80181 ACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACAGGG 80240 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 80241 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGT 80300 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 80301 AGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAG 80360 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 80361 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAA 80420 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 80421 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 80472 Score = 473 bits (524), Expect = 4e-131 Identities = 283/297 (95%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 162479 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 162538 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 162539 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 162598 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 162599 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 162658 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162659 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 162718 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 162719 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 162775 Score = 187 bits (206), Expect = 8e-45 Identities = 111/116 (96%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 91442 CGATGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCGGCGCTTCAT 91501 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 91502 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 91557 Score = 118 bits (130), Expect = 3e-24 Identities = 103/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 162164 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 162223 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 162224 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 162278 Query 127 GGCCCGCG 134 || |||| Sbjct 162279 GGGTCGCG 162286 >seq647 Length=82070 Score = 473 bits (524), Expect = 4e-131 Identities = 283/297 (95%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 61284 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 61225 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 61224 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 61165 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 61164 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 61105 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61104 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 61045 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 61044 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 60988 Score = 113 bits (124), Expect = 1e-22 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 61600 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 61541 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 61540 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 61494 >seq100 Length=1207509 Score = 450 bits (498), Expect = 4e-124 Identities = 445/584 (76%), Gaps = 61/584 (10%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | ||||||||||||||| ||| Sbjct 264772 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCATTACC 264713 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT- 125 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| | Sbjct 264712 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGTT 264653 Query 126 ---------------CGGCCCGCGAAG---GAC----------CTTAACGCCAGAAAATG 157 ||||||||| || ||| ||| | |||||| Sbjct 264652 GCACCAGGCCACCGCCGGCCCGCGTAGACCGACGGGGCGGGTGCTTGGCACCAGAAGCGA 264593 Query 158 G------TCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAG 211 | |||| | ||| || ||| || | ||| ||||||||||||| |||| Sbjct 264592 GAGCCCCTCGGGGCTCACCCCCTC----TCACTGGCTCAGTGAAAAAACGATAAGAGTAG 264537 Query 212 TGGTATTTCACTTGCG--CCGAAACGG--------------------CTCCCACTTATTC 249 ||||||||||| ||| ||| || || ||||||||||||| Sbjct 264536 TGGTATTTCACCGGCGGCCCGCAAGGGGGTGGGAGGGCGCTGGGGGCCTCCCACTTATTC 264477 Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309 |||||||||| ||| ||||| | | ||||||||||||||||||| ||||||||||| Sbjct 264476 TACACCTCTCTTGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAACGGGGTCTTCTTT 264417 Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369 |||| |||||| ||||||||| |||||||||||||||||||||| |||||||| ||||| Sbjct 264416 CCCCATTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGG 264357 Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429 || |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 264356 ACGGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGATGAGGCATTTGG 264297 Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 ||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||| Sbjct 264296 CTACCTTAAGAGAGTCATAGTTATTCCCGCCATTTACCCACGCTTCATTGAATTTCTTCA 264237 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||| |||||||||| |||||||| Sbjct 264236 CTTTGACATTCAGAGCACTGGGCGGAAATCACATCACGTCAACA 264193 >seq7 Length=173684459 Score = 181 bits (200), Expect = 3e-43 Identities = 139/156 (89%), Gaps = 8/156 (5%) Strand=Plus/Minus Query 339 TGGCTGTGGTTT-CGCTAGATAGTAGATAGGG-ACAGTGGGAATCTCGTTAATCCATTCA 396 |||||||||||| |||| |||||||| ||||| |||| ||||||||||| ||||||||| Sbjct 33622575 TGGCTGTGGTTTTCGCTGGATAGTAGGTAGGGGACAGGAGGAATCTCGTTCATCCATTCA 33622516 Query 397 TGCGCGTCACTAATTAGATGACGAGGCA-TTTGGCTACCTTAAGAGAGTCATAGTTACT- 454 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 33622515 TGCGCGTCACTAATTAGATGACGAGGCATTTTGGCTACCTTA--AGAGTCATAGTTACTC 33622458 Query 455 CCCGCCGTTTA-CCCGCGCTTGGTTGAA-TTTCTTC 488 ||| || |||| ||||||||| ||||| ||||||| Sbjct 33622457 CCCACCATTTACCCCGCGCTTCATTGAATTTTCTTC 33622422 >seq2 Length=174332312 Score = 179 bits (198), Expect = 1e-42 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 407 TAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 466 |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| Sbjct 56422249 TAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCAGTCATTTAC 56422308 Query 467 CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 || ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 56422309 CCACGCTTCATTGAATTTCTTTACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 56422365 >seq64 Length=2398104 Score = 159 bits (176), Expect = 1e-36 Identities = 126/153 (82%), Gaps = 11/153 (7%) Strand=Plus/Plus Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 ||||||||||||||||||||| ||| ||||| | | | ||||| |||||||||| |||| Sbjct 422945 CCACTTATTCTACACCTCTCATGTCTCTTCACCATGCCAGACTATAGTCAAGCTCTACAG 423004 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||||||| | ||||||| ||||||||||||||||| || |||| Sbjct 423005 GGTCTTCTTTCCCCAC-----------AGCCCGTACCCTTGGCTGTGGTTTCACTGGATA 423053 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCA 392 |||| ||||||||||||||||||| || ||||| Sbjct 423054 GTAGGTAGGGACAGTGGGAATCTCATTCATCCA 423086 >seq3 Length=155691105 Score = 158 bits (174), Expect = 4e-36 Identities = 193/259 (75%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 278 GGACTAGAGTCAAGCTCAACAGGGTCTTC-TTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336 ||||||| |||| || | |||||||| ||| || | ||| | ||||| | | | Sbjct 47447996 GGACTAGCATCAAACTTAGATGGGTCTTCCTTTACCTCCAGAT-CTGCCAATGCAACTAC 47447938 Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 ||||||||||| | ||| ||||||| || ||||| | |||| | || | |||||| Sbjct 47447937 CTTGGCTGTGGCTCTGCTGGATAGTACATGGGGACCATCAGAATGTGATTCACACATTCA 47447878 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 || || |||| ||| ||||| |||||||||| |||||| ||||||||||||| || Sbjct 47447877 TGTGCACCACTGATTTGATGA---GGCATTTGGCCACCTTACCAGAGTCATAGTTATTCA 47447821 Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516 | | | || | |||| |||||||||||||||||||||||| |||||| ||||||| Sbjct 47447820 CATTGATCACTCATGCTTCACTGAATTTCTTCACTTTGACATTCACAGCACTTGGCAGAA 47447761 Query 517 ATCACATTGCGTCAACATC 535 || |||| | |||||||| Sbjct 47447760 AT-ACATCCCCTCAACATC 47447743 Score = 95.1 bits (104), Expect = 4e-17 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 467 CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGC 526 |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| | Sbjct 73980803 CCGCGCTTTATTGAATTTCTTTACTTTGACATTTAGAGCACTGGGCAGAAATCACATCAC 73980744 Query 527 GTCAACA 533 ||||||| Sbjct 73980743 GTCAACA 73980737 >seq16 Length=84478945 Score = 127 bits (140), Expect = 7e-27 Identities = 88/100 (88%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||| || ||||| || ||||||||||| | |||| |||||||||| Sbjct 43867358 ATAGTAGGTAGGGACAGTAGGGATCTCATTCATCCATTCATGTGTGTCATTAATTAGATG 43867417 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||||| || ||||||||||| | |||||||||| Sbjct 43867418 ACGAGGCATTTGTCTCCCTTAAGAGAGGCGTAGTTACTCC 43867457 >seq12 Length=155355395 Score = 102 bits (112), Expect = 3e-19 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 ||| ||| || || | ||| |||||| || |||| |||||||||||| ||||| | ||| Sbjct 125094733 ATCTATTTATATGCATTACTTATTAGAGGAGGAGGGATTTGGCTACCTGAAGAGGGCCAT 125094674 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||| ||| || ||| | | | ||||| ||||||||||||| |||||||| ||| Sbjct 125094673 AGTTGCTCTTACCCTTTGTCTGATGGTTGTTGAGTTTCTTCACTTTGGCATTCAGAACAC 125094614 Query 508 TGGGCAGAAATCACAT 523 |||||||| ||||| Sbjct 125094613 TGGGCAGATGGCACAT 125094598 >seq2099 Length=9590 Score = 93.3 bits (102), Expect = 1e-16 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 ||||||| | | |||||||| ||||| || || ||||||||||| |||||||||||| Sbjct 5031 CTCCCGCTGGCTTTCCGCGCTTTATTGAAATTTTTTACTTTGACATTTAGAGCACTGGGC 4972 Query 513 AGAAATCACATTGCGTCAACA 533 ||||||||||| ||||||||| Sbjct 4971 AGAAATCACATCGCGTCAACA 4951 >seq1633 Length=15204 Score = 87.8 bits (96), Expect = 6e-15 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 ||||||| | | || ||||| ||||| || || ||||||||||| |||||||||||| Sbjct 7773 CTCCCGCTGGCTTTCCACGCTTTATTGAAATTTTTTACTTTGACATTTAGAGCACTGGGC 7714 Query 513 AGAAATCACATTGCGTCAACA 533 ||||||||||| ||||||||| Sbjct 7713 AGAAATCACATCGCGTCAACA 7693 >seq13 Length=143360832 Score = 87.8 bits (96), Expect = 6e-15 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||| ||| Sbjct 30529540 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCATTACC 30529599 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAA 94 |||| |||| ||| ||||||||| |||| Sbjct 30529600 GTTTGACAGGTGTACCGCCCCAGGCAAA 30529627 >seq321 Length=293404 Score = 84.2 bits (92), Expect = 7e-14 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| || ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 38555 TGAATTTTTTTACTTTGACATTTAGAGCACTGGGCAGAAATCACATCGCGTCAACA 38500 >seq172 Length=718166 Score = 84.2 bits (92), Expect = 7e-14 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 453 CTCCCGCCGTTTAC-CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA-GAGCACTGG 510 ||||||| | | | |||| ||| |||||||||| ||||||||| ||| ||||||||| Sbjct 606908 CTCCCGCTGGCTTCTCCGCACTTCACTGAATTTCTTTACTTTGACACTCAAGAGCACTGG 606967 Query 511 GCAGAAATCACATTGCGTCAACA 533 |||||||||||||||| |||||| Sbjct 606968 GCAGAAATCACATTGCATCAACA 606990 >seq141 Length=947161 Score = 84.2 bits (92), Expect = 7e-14 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 ||||||| | | |||| ||| ||||| || || ||||||||||| |||||||||||| Sbjct 545400 CTCCCGCTGGCTTTCCGCACTTTATTGAAATTTTTTACTTTGACATTTAGAGCACTGGGC 545459 Query 513 AGAAATCACATTGCGTCAACA 533 ||||||||||| || |||||| Sbjct 545460 AGAAATCACATCGCATCAACA 545480 >seq114 Length=1109196 Score = 84.2 bits (92), Expect = 7e-14 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 ||||||| | | | | |||| ||||||||||| ||||||||||| |||||||||||| Sbjct 903088 CTCCCGCTGGCTTTCTGTGCTTCATTGAATTTCTTTACTTTGACATTTAGAGCACTGGGC 903147 Query 513 AGAAATCACATTGCGTCAACA 533 |||||||| || | ||||||| Sbjct 903148 AGAAATCAAATCGTGTCAACA 903168 >seq1 Length=194850757 Score = 84.2 bits (92), Expect = 7e-14 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 ||||||| | | |||||||| ||||||||| | ||||||||||| |||||||||||| Sbjct 189285669 CTCCCGCTGGCTTTCCGCGCTTCATTGAATTTCCTTACTTTGACATTTAGAGCACTGGGC 189285610 Query 513 AGAAATCACATTGCGTCAACA 533 |||||| |||| ||| |||| Sbjct 189285609 AGAAATTACATCACGTTAACA 189285589 >seq1139 Length=43875 Score = 82.4 bits (90), Expect = 2e-13 Identities = 53/57 (93%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 478 TGAATTTCTTCACTTTGACATTCA-GAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||| Sbjct 28019 TGAATTTCTTTACTTTGACACTCAAGAGCACTGGGCAGAAATCACATTGCATCAACA 27963 >seq8 Length=111795807 Score = 82.4 bits (90), Expect = 2e-13 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 65559102 TCTTCACTTTGACATTCAGAGCAGTGGGCAGAAATCACATTGCGACAACA 65559151 >seq67 Length=2209796 Score = 80.6 bits (88), Expect = 9e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 467 CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGC 526 ||| |||| ||||||||||||||||||||||| ||||||||| ||| ||||||||| | Sbjct 2113089 CCGTGCTTTATTGAATTTCTTCACTTTGACATTTAGAGCACTGAGCATAAATCACATCAC 2113030 Query 527 GTCAACA 533 |||||| Sbjct 2113029 ATCAACA 2113023 >seq60 Length=2467970 Score = 80.6 bits (88), Expect = 9e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||| |||||||||||||||||||||||||||||| ||| || |||||| Sbjct 1141678 TTGAATTTCTTTACTTTGACATTCAGAGCACTGGGCAGAAATTGCATCGCATCAACA 1141734 >seq11 Length=87554214 Score = 80.6 bits (88), Expect = 9e-13 Identities = 58/66 (88%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 469 GCGCTTGGTTGAATTTCTTC-ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 |||||| |||||||| || ||||||||||| |||||||||||||||||| ||||||| Sbjct 51686731 GCGCTTCATTGAATTTTTTTTACTTTGACATTTAGAGCACTGGGCAGAAATTACATTGCA 51686790 Query 528 TCAACA 533 |||||| Sbjct 51686791 TCAACA 51686796 >seq6 Length=27502587 Score = 80.6 bits (88), Expect = 9e-13 Identities = 49/52 (94%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 12643232 TTTTTTTACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCATCAACA 12643181 >seq380 Length=208638 Score = 78.8 bits (86), Expect = 3e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||| | ||| |||||||||||||||||||||||||||| ||||| Sbjct 27174 TGAATTTCTTCACTATCACACTCAGAGCACTGGGCAGAAATCACATTGCAACAACA 27229 >seq213 Length=484298 Score = 77.0 bits (84), Expect = 1e-11 Identities = 65/79 (82%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 454 TCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC-ACTTTGACATTCAGAGCACTGGGC 512 |||||| | | || || ||| |||||||| || | |||||||||||||||||||||| Sbjct 57768 TCCCGCTGGCTTCCTGCACTTTATTGAATTTTTTTTATTTTGACATTCAGAGCACTGGGC 57709 Query 513 AGAAATCACATTGCGTCAA 531 ||||||||||| |||||| Sbjct 57708 AGAAATCACATCACGTCAA 57690 >seq185 Length=611938 Score = 77.0 bits (84), Expect = 1e-11 Identities = 67/82 (82%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 453 CTCCCGCCGTTTAC-CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511 ||||||| | | | |||| ||| |||||||||| ||| | ||| ||||||||||||| Sbjct 130350 CTCCCGCTGGCTTCTCCGCACTTCACTGAATTTCTTTACTATCACACTCAGAGCACTGGG 130291 Query 512 CAGAAATCACATTGCGTCAACA 533 ||||||||||||||| ||||| Sbjct 130290 CAGAAATCACATTGCAACAACA 130269 >seq10 Length=47997241 Score = 77.0 bits (84), Expect = 1e-11 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 469 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 |||||| ||||||||||| |||||||||| |||||| |||||||||||||||| || | Sbjct 31083145 GCGCTTCATTGAATTTCTTTACTTTGACATATAGAGCATTGGGCAGAAATCACATCGCAT 31083086 Query 529 CAACA 533 | ||| Sbjct 31083085 CCACA 31083081 >seq3124 Length=5235 Score = 75.2 bits (82), Expect = 4e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||| ||| | ||| |||||||||||||||||||||||||||| ||||| Sbjct 937 TGAATTTCTTTACTATCACACTCAGAGCACTGGGCAGAAATCACATTGCAACAACA 882 >seq2282 Length=8365 Score = 75.2 bits (82), Expect = 4e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||| ||| | ||| |||||||||||||||||||||||||||| ||||| Sbjct 2628 TGAATTTCTTTACTATCACACTCAGAGCACTGGGCAGAAATCACATTGCAACAACA 2573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635147003168