Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20]
3,241 sequences; 2,737,462,810 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq2163 749 0.0
seq438 497 3e-138
seq647 473 4e-131
seq100 450 4e-124
seq7 181 3e-43
seq2 179 1e-42
seq64 159 1e-36
seq3 158 4e-36
seq16 127 7e-27
seq12 102 3e-19
seq2099 93.3 1e-16
seq1633 87.8 6e-15
seq13 87.8 6e-15
seq321 84.2 7e-14
seq172 84.2 7e-14
seq141 84.2 7e-14
seq114 84.2 7e-14
seq1 84.2 7e-14
seq1139 82.4 2e-13
seq8 82.4 2e-13
seq67 80.6 9e-13
seq60 80.6 9e-13
seq11 80.6 9e-13
seq6 80.6 9e-13
seq380 78.8 3e-12
seq213 77.0 1e-11
seq185 77.0 1e-11
seq10 77.0 1e-11
seq3124 75.2 4e-11
seq2282 75.2 4e-11
>seq2163
Length=9074
Score = 749 bits (830), Expect = 0.0
Identities = 491/538 (91%), Gaps = 5/538 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1352 CTTTTGTTCTACTTGAGATTTCTGTTCTCAATGAGTCCCCCTTAGGACACCTGCGTTATT 1411
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1412 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCAGATC 1471
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||| ||||||||||| | | ||| ||| || || |||| || ||||||||||
Sbjct 1472 AGCCCAAAAAGGACCTTAATACTAAAAAGTGGGATGTTAATCCCAGCTCTGCTTCATTGA 1531
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||| || |||| ||||||||||||||||| |||| | |||||||||||
Sbjct 1532 ATAAGTAAAAAGACAATAAAGGTAGTGGTATTTCACTGGCGCTTAC---GCTCCCACTTA 1588
Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
||||||| ||||| | ||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct 1589 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 1647
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648 CTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 1707
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1708 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 1767
Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1768 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 1827
Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 1828 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACACCACTTTCTG 1885
>seq438
Length=171919
Score = 497 bits (550), Expect = 3e-138
Identities = 461/592 (78%), Gaps = 67/592 (11%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 79883 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 79942
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAA-------- 118
|||| |||| ||| ||||||||| ||||||||||||||| || |||| |
Sbjct 79943 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGTCG 80002
Query 119 --CCCGGAT-----CGGCCCGCGAAG---GAC-----------CTTAACGCCAGAAAATG 157
||||| ||||||||| | ||| ||| ||||||||
Sbjct 80003 CGCCCGGCCGCCGCCGGCCCGCGCGGACCGACGGGGCCCGGCGCTTGGCGCCAGAAGCGA 80062
Query 158 G------TCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAG 211
| |||| | || |||| ||| | | ||| ||||||||||||| ||||
Sbjct 80063 GAGCCCCTCGGGCTCGCCCCC--CCGCCTCACCGGGTCAGTGAAAAAACGATAAGAGTAG 80120
Query 212 TGGTATTTCACTTGCG------CCGAAA--------------------CGG----CTCCC 241
||||||||||| ||| ||| | ||| |||||
Sbjct 80121 TGGTATTTCACCGGCGGCTGGCCCGCCAGTGAGGGGGCGGGAGGGCGCCGGGGGCCTCCC 80180
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||||||||||||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 80181 ACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACAGGG 80240
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 80241 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGT 80300
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 80301 AGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAG 80360
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 80361 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAA 80420
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 80421 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 80472
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 162479 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 162538
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 162539 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 162598
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 162599 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 162658
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 162659 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 162718
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 162719 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 162775
Score = 187 bits (206), Expect = 8e-45
Identities = 111/116 (96%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 91442 CGATGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCGGCGCTTCAT 91501
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 91502 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 91557
Score = 118 bits (130), Expect = 3e-24
Identities = 103/128 (80%), Gaps = 5/128 (4%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 162164 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 162223
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| |
Sbjct 162224 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 162278
Query 127 GGCCCGCG 134
|| ||||
Sbjct 162279 GGGTCGCG 162286
>seq647
Length=82070
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 61284 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 61225
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 61224 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 61165
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 61164 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 61105
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61104 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 61045
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 61044 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 60988
Score = 113 bits (124), Expect = 1e-22
Identities = 89/107 (83%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 61600 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 61541
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| ||||||||| ||||||||||||||| || ||||
Sbjct 61540 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 61494
>seq100
Length=1207509
Score = 450 bits (498), Expect = 4e-124
Identities = 445/584 (76%), Gaps = 61/584 (10%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| | |||| ||||||| |||| |||| | ||||||||||||||| |||
Sbjct 264772 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCATTACC 264713
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT- 125
|||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| |
Sbjct 264712 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGTT 264653
Query 126 ---------------CGGCCCGCGAAG---GAC----------CTTAACGCCAGAAAATG 157
||||||||| || ||| ||| | ||||||
Sbjct 264652 GCACCAGGCCACCGCCGGCCCGCGTAGACCGACGGGGCGGGTGCTTGGCACCAGAAGCGA 264593
Query 158 G------TCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAG 211
| |||| | ||| || ||| || | ||| ||||||||||||| ||||
Sbjct 264592 GAGCCCCTCGGGGCTCACCCCCTC----TCACTGGCTCAGTGAAAAAACGATAAGAGTAG 264537
Query 212 TGGTATTTCACTTGCG--CCGAAACGG--------------------CTCCCACTTATTC 249
||||||||||| ||| ||| || || |||||||||||||
Sbjct 264536 TGGTATTTCACCGGCGGCCCGCAAGGGGGTGGGAGGGCGCTGGGGGCCTCCCACTTATTC 264477
Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309
|||||||||| ||| ||||| | | ||||||||||||||||||| |||||||||||
Sbjct 264476 TACACCTCTCTTGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAACGGGGTCTTCTTT 264417
Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369
|||| |||||| ||||||||| |||||||||||||||||||||| |||||||| |||||
Sbjct 264416 CCCCATTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGG 264357
Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429
|| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 264356 ACGGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGATGAGGCATTTGG 264297
Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||
Sbjct 264296 CTACCTTAAGAGAGTCATAGTTATTCCCGCCATTTACCCACGCTTCATTGAATTTCTTCA 264237
Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||| |||||||||| ||||||||
Sbjct 264236 CTTTGACATTCAGAGCACTGGGCGGAAATCACATCACGTCAACA 264193
>seq7
Length=173684459
Score = 181 bits (200), Expect = 3e-43
Identities = 139/156 (89%), Gaps = 8/156 (5%)
Strand=Plus/Minus
Query 339 TGGCTGTGGTTT-CGCTAGATAGTAGATAGGG-ACAGTGGGAATCTCGTTAATCCATTCA 396
|||||||||||| |||| |||||||| ||||| |||| ||||||||||| |||||||||
Sbjct 33622575 TGGCTGTGGTTTTCGCTGGATAGTAGGTAGGGGACAGGAGGAATCTCGTTCATCCATTCA 33622516
Query 397 TGCGCGTCACTAATTAGATGACGAGGCA-TTTGGCTACCTTAAGAGAGTCATAGTTACT- 454
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 33622515 TGCGCGTCACTAATTAGATGACGAGGCATTTTGGCTACCTTA--AGAGTCATAGTTACTC 33622458
Query 455 CCCGCCGTTTA-CCCGCGCTTGGTTGAA-TTTCTTC 488
||| || |||| ||||||||| ||||| |||||||
Sbjct 33622457 CCCACCATTTACCCCGCGCTTCATTGAATTTTCTTC 33622422
>seq2
Length=174332312
Score = 179 bits (198), Expect = 1e-42
Identities = 110/117 (94%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 407 TAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 466
|||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||
Sbjct 56422249 TAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCAGTCATTTAC 56422308
Query 467 CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523
|| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 56422309 CCACGCTTCATTGAATTTCTTTACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 56422365
>seq64
Length=2398104
Score = 159 bits (176), Expect = 1e-36
Identities = 126/153 (82%), Gaps = 11/153 (7%)
Strand=Plus/Plus
Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299
||||||||||||||||||||| ||| ||||| | | | ||||| |||||||||| ||||
Sbjct 422945 CCACTTATTCTACACCTCTCATGTCTCTTCACCATGCCAGACTATAGTCAAGCTCTACAG 423004
Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359
|||||||||||||| | ||||||| ||||||||||||||||| || ||||
Sbjct 423005 GGTCTTCTTTCCCCAC-----------AGCCCGTACCCTTGGCTGTGGTTTCACTGGATA 423053
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCA 392
|||| ||||||||||||||||||| || |||||
Sbjct 423054 GTAGGTAGGGACAGTGGGAATCTCATTCATCCA 423086
>seq3
Length=155691105
Score = 158 bits (174), Expect = 4e-36
Identities = 193/259 (75%), Gaps = 6/259 (2%)
Strand=Plus/Minus
Query 278 GGACTAGAGTCAAGCTCAACAGGGTCTTC-TTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336
||||||| |||| || | |||||||| ||| || | ||| | ||||| | | |
Sbjct 47447996 GGACTAGCATCAAACTTAGATGGGTCTTCCTTTACCTCCAGAT-CTGCCAATGCAACTAC 47447938
Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396
||||||||||| | ||| ||||||| || ||||| | |||| | || | ||||||
Sbjct 47447937 CTTGGCTGTGGCTCTGCTGGATAGTACATGGGGACCATCAGAATGTGATTCACACATTCA 47447878
Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456
|| || |||| ||| ||||| |||||||||| |||||| ||||||||||||| ||
Sbjct 47447877 TGTGCACCACTGATTTGATGA---GGCATTTGGCCACCTTACCAGAGTCATAGTTATTCA 47447821
Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516
| | | || | |||| |||||||||||||||||||||||| |||||| |||||||
Sbjct 47447820 CATTGATCACTCATGCTTCACTGAATTTCTTCACTTTGACATTCACAGCACTTGGCAGAA 47447761
Query 517 ATCACATTGCGTCAACATC 535
|| |||| | ||||||||
Sbjct 47447760 AT-ACATCCCCTCAACATC 47447743
Score = 95.1 bits (104), Expect = 4e-17
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 467 CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGC 526
|||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct 73980803 CCGCGCTTTATTGAATTTCTTTACTTTGACATTTAGAGCACTGGGCAGAAATCACATCAC 73980744
Query 527 GTCAACA 533
|||||||
Sbjct 73980743 GTCAACA 73980737
>seq16
Length=84478945
Score = 127 bits (140), Expect = 7e-27
Identities = 88/100 (88%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||| || ||||| || ||||||||||| | |||| ||||||||||
Sbjct 43867358 ATAGTAGGTAGGGACAGTAGGGATCTCATTCATCCATTCATGTGTGTCATTAATTAGATG 43867417
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456
|||||||||||| || ||||||||||| | ||||||||||
Sbjct 43867418 ACGAGGCATTTGTCTCCCTTAAGAGAGGCGTAGTTACTCC 43867457
>seq12
Length=155355395
Score = 102 bits (112), Expect = 3e-19
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447
||| ||| || || | ||| |||||| || |||| |||||||||||| ||||| | |||
Sbjct 125094733 ATCTATTTATATGCATTACTTATTAGAGGAGGAGGGATTTGGCTACCTGAAGAGGGCCAT 125094674
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
|||| ||| || ||| | | | ||||| ||||||||||||| |||||||| |||
Sbjct 125094673 AGTTGCTCTTACCCTTTGTCTGATGGTTGTTGAGTTTCTTCACTTTGGCATTCAGAACAC 125094614
Query 508 TGGGCAGAAATCACAT 523
|||||||| |||||
Sbjct 125094613 TGGGCAGATGGCACAT 125094598
>seq2099
Length=9590
Score = 93.3 bits (102), Expect = 1e-16
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512
||||||| | | |||||||| ||||| || || ||||||||||| ||||||||||||
Sbjct 5031 CTCCCGCTGGCTTTCCGCGCTTTATTGAAATTTTTTACTTTGACATTTAGAGCACTGGGC 4972
Query 513 AGAAATCACATTGCGTCAACA 533
||||||||||| |||||||||
Sbjct 4971 AGAAATCACATCGCGTCAACA 4951
>seq1633
Length=15204
Score = 87.8 bits (96), Expect = 6e-15
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512
||||||| | | || ||||| ||||| || || ||||||||||| ||||||||||||
Sbjct 7773 CTCCCGCTGGCTTTCCACGCTTTATTGAAATTTTTTACTTTGACATTTAGAGCACTGGGC 7714
Query 513 AGAAATCACATTGCGTCAACA 533
||||||||||| |||||||||
Sbjct 7713 AGAAATCACATCGCGTCAACA 7693
>seq13
Length=143360832
Score = 87.8 bits (96), Expect = 6e-15
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||| |||
Sbjct 30529540 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCATTACC 30529599
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAA 94
|||| |||| ||| ||||||||| ||||
Sbjct 30529600 GTTTGACAGGTGTACCGCCCCAGGCAAA 30529627
>seq321
Length=293404
Score = 84.2 bits (92), Expect = 7e-14
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 38555 TGAATTTTTTTACTTTGACATTTAGAGCACTGGGCAGAAATCACATCGCGTCAACA 38500
>seq172
Length=718166
Score = 84.2 bits (92), Expect = 7e-14
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand=Plus/Plus
Query 453 CTCCCGCCGTTTAC-CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA-GAGCACTGG 510
||||||| | | | |||| ||| |||||||||| ||||||||| ||| |||||||||
Sbjct 606908 CTCCCGCTGGCTTCTCCGCACTTCACTGAATTTCTTTACTTTGACACTCAAGAGCACTGG 606967
Query 511 GCAGAAATCACATTGCGTCAACA 533
|||||||||||||||| ||||||
Sbjct 606968 GCAGAAATCACATTGCATCAACA 606990
>seq141
Length=947161
Score = 84.2 bits (92), Expect = 7e-14
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512
||||||| | | |||| ||| ||||| || || ||||||||||| ||||||||||||
Sbjct 545400 CTCCCGCTGGCTTTCCGCACTTTATTGAAATTTTTTACTTTGACATTTAGAGCACTGGGC 545459
Query 513 AGAAATCACATTGCGTCAACA 533
||||||||||| || ||||||
Sbjct 545460 AGAAATCACATCGCATCAACA 545480
>seq114
Length=1109196
Score = 84.2 bits (92), Expect = 7e-14
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512
||||||| | | | | |||| ||||||||||| ||||||||||| ||||||||||||
Sbjct 903088 CTCCCGCTGGCTTTCTGTGCTTCATTGAATTTCTTTACTTTGACATTTAGAGCACTGGGC 903147
Query 513 AGAAATCACATTGCGTCAACA 533
|||||||| || | |||||||
Sbjct 903148 AGAAATCAAATCGTGTCAACA 903168
>seq1
Length=194850757
Score = 84.2 bits (92), Expect = 7e-14
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512
||||||| | | |||||||| ||||||||| | ||||||||||| ||||||||||||
Sbjct 189285669 CTCCCGCTGGCTTTCCGCGCTTCATTGAATTTCCTTACTTTGACATTTAGAGCACTGGGC 189285610
Query 513 AGAAATCACATTGCGTCAACA 533
|||||| |||| ||| ||||
Sbjct 189285609 AGAAATTACATCACGTTAACA 189285589
>seq1139
Length=43875
Score = 82.4 bits (90), Expect = 2e-13
Identities = 53/57 (93%), Gaps = 1/57 (2%)
Strand=Plus/Minus
Query 478 TGAATTTCTTCACTTTGACATTCA-GAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||| ||||||||| ||| ||||||||||||||||||||||||| ||||||
Sbjct 28019 TGAATTTCTTTACTTTGACACTCAAGAGCACTGGGCAGAAATCACATTGCATCAACA 27963
>seq8
Length=111795807
Score = 82.4 bits (90), Expect = 2e-13
Identities = 48/50 (96%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 65559102 TCTTCACTTTGACATTCAGAGCAGTGGGCAGAAATCACATTGCGACAACA 65559151
>seq67
Length=2209796
Score = 80.6 bits (88), Expect = 9e-13
Identities = 58/67 (87%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 467 CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGC 526
||| |||| ||||||||||||||||||||||| ||||||||| ||| ||||||||| |
Sbjct 2113089 CCGTGCTTTATTGAATTTCTTCACTTTGACATTTAGAGCACTGAGCATAAATCACATCAC 2113030
Query 527 GTCAACA 533
||||||
Sbjct 2113029 ATCAACA 2113023
>seq60
Length=2467970
Score = 80.6 bits (88), Expect = 9e-13
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||| |||||||||||||||||||||||||||||| ||| || ||||||
Sbjct 1141678 TTGAATTTCTTTACTTTGACATTCAGAGCACTGGGCAGAAATTGCATCGCATCAACA 1141734
>seq11
Length=87554214
Score = 80.6 bits (88), Expect = 9e-13
Identities = 58/66 (88%), Gaps = 1/66 (2%)
Strand=Plus/Plus
Query 469 GCGCTTGGTTGAATTTCTTC-ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527
|||||| |||||||| || ||||||||||| |||||||||||||||||| |||||||
Sbjct 51686731 GCGCTTCATTGAATTTTTTTTACTTTGACATTTAGAGCACTGGGCAGAAATTACATTGCA 51686790
Query 528 TCAACA 533
||||||
Sbjct 51686791 TCAACA 51686796
>seq6
Length=27502587
Score = 80.6 bits (88), Expect = 9e-13
Identities = 49/52 (94%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 12643232 TTTTTTTACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCATCAACA 12643181
>seq380
Length=208638
Score = 78.8 bits (86), Expect = 3e-12
Identities = 51/56 (91%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||| | ||| |||||||||||||||||||||||||||| |||||
Sbjct 27174 TGAATTTCTTCACTATCACACTCAGAGCACTGGGCAGAAATCACATTGCAACAACA 27229
>seq213
Length=484298
Score = 77.0 bits (84), Expect = 1e-11
Identities = 65/79 (82%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 454 TCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC-ACTTTGACATTCAGAGCACTGGGC 512
|||||| | | || || ||| |||||||| || | ||||||||||||||||||||||
Sbjct 57768 TCCCGCTGGCTTCCTGCACTTTATTGAATTTTTTTTATTTTGACATTCAGAGCACTGGGC 57709
Query 513 AGAAATCACATTGCGTCAA 531
||||||||||| ||||||
Sbjct 57708 AGAAATCACATCACGTCAA 57690
>seq185
Length=611938
Score = 77.0 bits (84), Expect = 1e-11
Identities = 67/82 (82%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 453 CTCCCGCCGTTTAC-CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511
||||||| | | | |||| ||| |||||||||| ||| | ||| |||||||||||||
Sbjct 130350 CTCCCGCTGGCTTCTCCGCACTTCACTGAATTTCTTTACTATCACACTCAGAGCACTGGG 130291
Query 512 CAGAAATCACATTGCGTCAACA 533
||||||||||||||| |||||
Sbjct 130290 CAGAAATCACATTGCAACAACA 130269
>seq10
Length=47997241
Score = 77.0 bits (84), Expect = 1e-11
Identities = 56/65 (86%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 469 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528
|||||| ||||||||||| |||||||||| |||||| |||||||||||||||| || |
Sbjct 31083145 GCGCTTCATTGAATTTCTTTACTTTGACATATAGAGCATTGGGCAGAAATCACATCGCAT 31083086
Query 529 CAACA 533
| |||
Sbjct 31083085 CCACA 31083081
>seq3124
Length=5235
Score = 75.2 bits (82), Expect = 4e-11
Identities = 50/56 (89%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||| ||| | ||| |||||||||||||||||||||||||||| |||||
Sbjct 937 TGAATTTCTTTACTATCACACTCAGAGCACTGGGCAGAAATCACATTGCAACAACA 882
>seq2282
Length=8365
Score = 75.2 bits (82), Expect = 4e-11
Identities = 50/56 (89%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||| ||| | ||| |||||||||||||||||||||||||||| |||||
Sbjct 2628 TGAATTTCTTTACTATCACACTCAGAGCACTGGGCAGAAATCACATTGCAACAACA 2573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635147003168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |