Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq340201 109 1e-21 seq632521 95.1 2e-17 >seq340201 Length=355 Score = 109 bits (120), Expect = 1e-21 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||||||| Sbjct 27 GCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATT 86 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| ||| Sbjct 87 ATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTC 146 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 147 CCTGCCCTTTGTA 159 >seq632521 Length=653 Score = 95.1 bits (104), Expect = 2e-17 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 ||||||||| ||||||||||||| |||||| ||||||||| |||| | ||| || |||| Sbjct 128 AAGTTTGAG-CAATAACAGGTCTATGATGCACTTAGATGTCCTGGTCTGCATGCATGCTA 186 Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224 ||||||| || || || | | ||| | || ||| ||||||| | |||| ||| Sbjct 187 CACTGACTGACTCAGTATGTGCTTATCCTGCACTGGTAGGCATGGGTAA-CCTGTTGAAC 245 Query 225 -TCTGTCGTGCTGGGGAT-AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 | | ||| ||||||| |||| | |||||||||| | || || ||| || | | Sbjct 246 ACCATTGGTGATGGGGATCAGAG-ACTGCAATTATT-CCAAAGAAGGAACAATTCCCAAT 303 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||| | | ||||| ||| | |||||||| Sbjct 304 AAGTGTGGGTCATAAGCTTGTGTTGATTA 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 933350723584