Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1038529 288 3e-75 seq1128521 266 1e-68 seq281336 217 5e-54 seq916227 178 4e-42 seq1452361 152 2e-34 seq1252313 82.4 2e-13 seq859600 82.4 2e-13 seq1304012 80.6 9e-13 >seq1038529 Length=1523 Score = 288 bits (318), Expect = 3e-75 Identities = 230/276 (83%), Gaps = 1/276 (0%) Strand=Plus/Plus Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 |||||| |||||||| ||||| ||| |||| | | | | |||||| | ||||||||| Sbjct 175 CCACTTGTTCTACACTTCTCATGTCTCTTCATCATGCCAGCTTAGAGTTATGCTCAACAG 234 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||||||| |||||| ||||||||| |||||||||||||| |||| |||| | Sbjct 235 GGTCTTCTTTCCCCAATGATTCTGCCAAGCCCATTCCCTTGGCTGTGATTTCACTAGGTG 294 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||| || ||||||||| |||||| || |||||| ||||| | |||||||||||||| | Sbjct 295 GTAGCTATGGACAGTGGAAATCTCTTTCATCCATCCATGCACACCACTAATTAGATGATG 354 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 ||| |||| | ||||| ||| ||||||||||||| || || ||||||||| |||| ||| Sbjct 355 AGGTATTTAGGTACCTAAAGGGAGTCATAGTTACGCCTGCTGTTTACCCGTGCTTCATTG 414 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515 ||||||||||| |||||||| |||||||||| |||| Sbjct 415 AATTTCTTCAC-TTGACATTTAGAGCACTGGACAGA 449 >seq1128521 Length=1873 Score = 266 bits (294), Expect = 1e-68 Identities = 185/214 (86%), Gaps = 16/214 (7%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||||| |||||| ||| ||||| || |||||| Sbjct 198 CTCCCACTTATTCTACAACTCTCATGTCTCTTCAC----------------CATGCTCAA 155 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| | Sbjct 154 CAGGGTCTTCTTTCCCTGCTGATTCCGCCAAGCCCGTTCCCTTGACGGTGGTTTCGCTGG 95 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct 94 ATAGTAGGTAGGGACAGTGGGAGTCTCGTTCATCCATTCATGCGTGTCACTAATTAGATG 35 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 450 |||||||||||||||||||||||||||||||||| Sbjct 34 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 1 Score = 86.0 bits (94), Expect = 2e-14 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | ||| ||||||| |||| || | | | ||||||||||||| ||| Sbjct 450 CTTCTGCTCCATGAGAGGTTTCTGTCCTCCCTGGGCTCACGTTAGGACACCTGCATTACC 391 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| || |||||| ||||||| ||||||| || |||| Sbjct 390 GTTTGACAGGTGTACCACCCCAGTCAAACTCTCCACCTGGCACTGTC 344 >seq281336 Length=316 Score = 217 bits (240), Expect = 5e-54 Identities = 125/128 (98%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 60 Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 61 CCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCG 120 Query 526 CGTCAACA 533 |||||||| Sbjct 121 CGTCAACA 128 >seq916227 Length=1173 Score = 178 bits (196), Expect = 4e-42 Identities = 110/118 (93%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 1173 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTTCCGCTGTTTA 1114 Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 ||| |||| ||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct 1113 CCCATGCTTCATTGAATTTCTTCACTTTGACATTCAGAACACTGGACAGAAATCACAT 1056 >seq1452361 Length=8522 Score = 152 bits (168), Expect = 2e-34 Identities = 110/127 (87%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC 468 |||||| || ||||||||||||||||||||||||||| || ||||||| || |||| || Sbjct 8020 ATTAGAAGAAAAGGCATTTGGCTACCTTAAGAGAGTCACAGATACTCCCACCATTTATCC 7961 Query 469 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 ||||| ||| |||||||||||| ||||||||||||||||||||||||| |||| | || Sbjct 7960 ACGCTTCATTGCATTTCTTCACTTGGACATTCAGAGCACTGGGCAGAAATGACATCGGGT 7901 Query 529 CAACATC 535 | ||||| Sbjct 7900 CGACATC 7894 >seq1252313 Length=2602 Score = 82.4 bits (90), Expect = 2e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464 ||||||||||||| ||| |||||||||||| ||||| ||||||| |||| | ||| ||| Sbjct 1187 ACTAATTAGATGATGAGACATTTGGCTACCCTAAGAAAGTCATACATACTTCTGCCATTT 1246 Query 465 ACCCGCGCTTGGTTGAATTTCTTCA 489 |||| | ||| || |||| |||| Sbjct 1247 ACCCACCCTTAATTACATTTATTCA 1271 >seq859600 Length=1044 Score = 82.4 bits (90), Expect = 2e-13 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 || |||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 186 TTTTTCATTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC 134 >seq1304012 Length=3074 Score = 80.6 bits (88), Expect = 9e-13 Identities = 49/52 (94%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||| ||||||||| ||||||||||||||||||||| ||||||||| Sbjct 174 TTTCTTCACTATGACATTCAAAGCACTGGGCAGAAATCACATCGCGTCAACA 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1611291282944