Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value SEQ34883 93.3 2e-17 SEQ51986 86.0 3e-15 >SEQ34883 Length=88904 Score = 93.3 bits (102), Expect = 2e-17 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGA--AGAGCCCAG 58 ||||||||| |||||||||||||||| |||||| ||| ||||||||||| ||||||||| Sbjct 69188 GGAAAAGAA-CTAACCAGGATTCCCTAAGTAACCGCGGGTGAACAGGGAGGAGAGCCCAG 69246 Query 59 CGCCGAATCCCCGCCCCGCGGTGGGGC 85 |||| |||||| || | |||| ||| Sbjct 69247 CGCCAAATCCCGGCTGTGTGGTGTGGC 69273 >SEQ51986 Length=73073 Score = 86.0 bits (94), Expect = 3e-15 Identities = 60/69 (87%), Gaps = 6/69 (9%) Strand=Plus/Plus Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61 |||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 35895 GAAAAGAAACTAACCAGGATTCCCTCAGTA------AGTGAACAGGGAAGAGCCCAGCAC 35948 Query 62 CGAATCCCC 70 |||| ||| Sbjct 35949 TGAATTCCC 35957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230191717680