Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value SEQ74697 136 8e-30 >SEQ74697 Length=231 Score = 136 bits (150), Expect = 8e-30 Identities = 135/175 (77%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct 231 CGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 172 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||| ||||| || | |||||||||| | ||| ||||| | || |||| ||| ||| Sbjct 171 CCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAGGATCGTCGCCTTGGTGCGCCTTTA 112 Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTTAAT 316 || | || |||| ||||| |||| | |||| | |||| ||||||| || Sbjct 111 CCACACCAACTAGCTAATCCTACGCGGGCTCATCCTCAGGCGATAAATCTTTGAT 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1067769388224